Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 AK4P3-201ENST00000418260 669 ntBASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TSPY21P-201ENST00000433481 731 ntBASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 AP003041.3-201ENST00000527151 707 ntBASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 AL138966.2-201ENST00000621997 464 ntBASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRGV5A0A0B4J1U4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 SDHAP1-207ENST00000440850 2000 ntBASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRGV5A0A0B4J1U4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRGV5A0A0B4J1U4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.2■□□□□ 0.34
TRGV5A0A0B4J1U4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRGV5A0A0B4J1U4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms