Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC026185.1-201ENST00000445748 174 ntBASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
TRBV6-7A0A0A0MS04 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MIR663A-201ENST00000385250 93 ntBASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MIPEPP3-201ENST00000412105 444 ntBASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 RAP2CP1-201ENST00000605103 478 ntBASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.05■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DUSP5P2-201ENST00000426873 1033 ntBASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms