Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 AC090340.1-201ENST00000620778 4980 ntBASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
TRAV26-1A0A087WT03 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC099398.1-201ENST00000567919 2776 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC004408.2-201ENST00000623613 2777 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC239809.2-201ENST00000415381 517 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 C1QBPP2-201ENST00000528754 825 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AL023875.1-201ENST00000640777 796 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 TCF3P1-201ENST00000423021 1937 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC007613.1-201ENST00000572811 2597 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 AC116351.2-201ENST00000606540 1585 ntBASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 PRORSD1P-201ENST00000295112 541 ntBASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 MTDHP1-201ENST00000605323 784 ntBASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FAM197Y4-202ENST00000622692 608 ntBASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 AP001271.2-201ENST00000624018 1556 ntBASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TRAV26-1A0A087WT03 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 RN7SL471P-201ENST00000580476 299 ntBASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV26-1A0A087WT03 TMEM179-206ENST00000616017 1645 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms