Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 UBE2DNL-204ENST00000602536 740 ntBASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV9-2A0A087WT02 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-2A0A087WT02 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 RARRES2P11-201ENST00000635158 484 ntBASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-2A0A087WT02 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 AL691432.2-201ENST00000607222 2038 ntBASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 AC026185.1-201ENST00000445748 174 ntBASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-2A0A087WT02 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 WIZP1-201ENST00000531444 2299 ntBASIC14.25□□□□□ -0.13
TRAV9-2A0A087WT02 SIRPAP1-201ENST00000448467 1770 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms