Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 RPL21P23-201ENST00000446654 460 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC004022.1-201ENST00000447766 1066 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 MTCO1P48-201ENST00000448024 1096 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 ZNF886P-201ENST00000450781 723 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AL445669.2-201ENST00000454425 421 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC091564.1-201ENST00000464563 479 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AP002884.2-201ENST00000471647 395 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC078918.1-201ENST00000498515 228 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 HMGB1P22-201ENST00000505315 124 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC005921.1-201ENST00000510589 286 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 PHBP14-201ENST00000512887 367 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC008837.2-201ENST00000513076 418 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 RNU6-415P-201ENST00000516252 97 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 RNU6-1225P-201ENST00000516336 65 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AL049838.1-201ENST00000563647 981 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 MIR3922-201ENST00000585192 84 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC010928.3-201ENST00000587712 541 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AL669831.4-202ENST00000590817 238 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC112230.1-201ENST00000604342 547 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC016877.3-201ENST00000606778 504 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC092954.1-201ENST00000609121 445 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AP000240.1-201ENST00000609910 452 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC099778.2-201ENST00000610904 211 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 MIR8058-201ENST00000615737 89 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC243312.2-201ENST00000623340 601 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC092326.2-201ENST00000624772 1561 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC120349.2-201ENST00000625002 298 ntBASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HDHD3Q9BSH5 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
HDHD3Q9BSH5 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 SNORA31-201ENST00000362607 130 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 RNU5D-1-201ENST00000363299 116 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 RNU6-629P-201ENST00000384061 103 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC016769.3-201ENST00000396562 315 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 RNA5SP80-201ENST00000410475 111 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 HSPD1P21-201ENST00000436541 245 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC127537.2-201ENST00000439258 465 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 TRGVB-201ENST00000453257 471 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 RN7SL75P-201ENST00000461926 281 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC013828.1-201ENST00000481845 158 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC093278.1-201ENST00000494700 600 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC021678.1-201ENST00000505195 936 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 OR5D17P-201ENST00000531492 978 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 LSM6P2-201ENST00000552208 177 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 HIGD1AP17-201ENST00000554576 276 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AL132857.1-201ENST00000555180 708 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 MTCYBP23-201ENST00000558717 1102 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 GTF2IP8-201ENST00000560687 584 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC107954.1-201ENST00000565906 727 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC090616.5-202ENST00000582111 297 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 MIR4276-201ENST00000584832 70 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC025588.3-201ENST00000604182 274 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC124312.4-201ENST00000605533 310 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC011816.2-201ENST00000607089 556 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AL591516.1-201ENST00000611326 274 ntBASIC2.71□□□□□ -1.98
HDHD3Q9BSH5 AC107075.1-201ENST00000613695 314 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms