Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 EIF5P1-201ENST00000400019 1231 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-293P-201ENST00000411259 106 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC096921.1-201ENST00000411661 375 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RPS15AP27-201ENST00000449183 343 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC104472.2-201ENST00000469035 601 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL547P-201ENST00000490793 290 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RN7SKP66-201ENST00000516681 231 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC022884.3-201ENST00000579571 248 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 RN7SL708P-201ENST00000580952 299 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC017100.2-201ENST00000584628 355 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AL352984.2-202ENST00000613699 155 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 AL161423.1-201ENST00000613700 262 ntBASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.73□□□□□ -1.33
NKX2-3Q8TAU0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC009313.2-201ENST00000417893 1941 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 Y_RNA.84-201ENST00000363011 104 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 SNORD1C-201ENST00000363315 78 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 RNU6-511P-201ENST00000363496 107 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 Y_RNA.183-201ENST00000363882 113 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 Y_RNA.237-201ENST00000364439 102 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 U3.10-201ENST00000364459 214 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 U3.20-201ENST00000390909 217 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL645733.1-201ENST00000402250 217 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL138885.1-201ENST00000405921 675 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 BX682237.1-201ENST00000415016 335 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC096920.1-201ENST00000423991 241 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 MRPS18BP2-201ENST00000434310 759 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 CEACAMP7-201ENST00000444105 496 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 RPS3AP46-201ENST00000448352 682 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC116533.1-201ENST00000459748 321 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 UBA52P7-201ENST00000486088 380 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 RPL17P19-201ENST00000489069 552 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AP002812.1-201ENST00000495378 474 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL049779.2-201ENST00000553847 315 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL355877.2-201ENST00000603670 358 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AL118522.2-201ENST00000616045 615 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC025034.2-201ENST00000623264 286 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 LINC01963-201ENST00000562038 3148 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 SDAD1P2-201ENST00000441308 2028 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 AC006206.1-201ENST00000544842 3387 ntBASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NKX2-3Q8TAU0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 AC009902.3-201ENST00000606235 2172 ntBASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
NKX2-3Q8TAU0 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 SNORA70.9-201ENST00000384370 135 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 HMGB3P7-201ENST00000400214 611 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AL133384.1-201ENST00000412744 351 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC010881.1-201ENST00000433830 235 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AL390119.1-201ENST00000440329 312 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC100832.1-201ENST00000471945 383 ntBASIC6.71□□□□□ -1.34
NKX2-3Q8TAU0 AC008953.1-201ENST00000497334 318 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms