Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 TAB3P1-202ENST00000452645 1634 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC067945.1-201ENST00000342609 618 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 U3.15-201ENST00000365398 212 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 RNU6-510P-201ENST00000391239 108 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 PPIAP9-201ENST00000403866 498 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AL162578.1-201ENST00000406202 378 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 U3.36-201ENST00000408418 213 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 PPP1R11P2-201ENST00000423543 382 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 ERLEC1P1-201ENST00000433806 578 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 TDGF1P1-201ENST00000445734 527 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 SNRPFP3-201ENST00000457792 225 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC108161.1-201ENST00000461060 402 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC022690.1-201ENST00000526681 550 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC243972.3-201ENST00000539655 198 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 AC109583.2-201ENST00000617367 129 ntBASIC6.04□□□□□ -1.44
RETREG2Q8NC44 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RETREG2Q8NC44 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AC139769.1-204ENST00000472297 1931 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 Y_RNA.142-201ENST00000363491 102 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNA5SP455-201ENST00000365190 119 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 SNORD56.6-201ENST00000384569 71 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNU6-903P-201ENST00000391270 109 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNA5SP241-201ENST00000391326 114 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 SSXP9-201ENST00000417503 292 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RPL7AP49-201ENST00000429522 581 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AL365400.1-201ENST00000431854 640 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AL591438.1-201ENST00000433508 581 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 CYCSP43-201ENST00000438233 310 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 Z80107.2-201ENST00000445127 392 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AC010631.1-201ENST00000474150 156 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNU6-390P-201ENST00000516259 103 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 RNU6-840P-201ENST00000517275 65 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 AL022311.1-201ENST00000623726 19416 ntBASIC6.03□□□□□ -1.44
RETREG2Q8NC44 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.03□□□□□ -1.44
RETREG2Q8NC44 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.44
RETREG2Q8NC44 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 AC103710.2-202ENST00000641454 2853 ntBASIC6.02□□□□□ -1.45
RETREG2Q8NC44 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 Y_RNA.100-201ENST00000363141 102 ntBASIC6.02□□□□□ -1.45
RETREG2Q8NC44 RNU6-188P-201ENST00000364207 107 ntBASIC6.02□□□□□ -1.45
RETREG2Q8NC44 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RETREG2Q8NC44 SNORA16A-201ENST00000384342 137 ntBASIC6.02□□□□□ -1.45
RETREG2Q8NC44 MIR514A2-201ENST00000385131 88 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms