Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NPM1P49-201ENST00000448027 714 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 RPS27AP9-201ENST00000477681 438 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.14□□□□□ -1.91
CLTCL1P53675 RNU6-548P-201ENST00000517083 115 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.14□□□□□ -1.91
CLTCL1P53675 AC004486.1-201ENST00000546846 233 ntBASIC3.14□□□□□ -1.91
CLTCL1P53675 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.14□□□□□ -1.91
CLTCL1P53675 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.13□□□□□ -1.91
CLTCL1P53675 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLTCL1P53675 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLTCL1P53675 TRBV26-201ENST00000456572 344 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 AC132942.1-201ENST00000486753 483 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 AC018630.1-201ENST00000541376 925 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.13□□□□□ -1.91
CLTCL1P53675 OR11H5P-201ENST00000554039 926 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 MAGOH2P-202ENST00000584384 429 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 AC016727.1-205ENST00000605437 569 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 AL451074.6-201ENST00000608512 729 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 AP001521.1-201ENST00000609150 300 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLTCL1P53675 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLTCL1P53675 CDC27P2-201ENST00000425026 1922 ntBASIC3.13□□□□□ -1.91
CLTCL1P53675 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLTCL1P53675 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLTCL1P53675 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLTCL1P53675 AC091152.2-201ENST00000591628 2569 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.12□□□□□ -1.91
CLTCL1P53675 USP9YP7-201ENST00000436723 430 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLTCL1P53675 USP9YP32-201ENST00000452432 430 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.12□□□□□ -1.91
CLTCL1P53675 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.12□□□□□ -1.91
CLTCL1P53675 VTA1P2-201ENST00000520205 911 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.12□□□□□ -1.91
CLTCL1P53675 OR4R2P-201ENST00000530815 597 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 AL137847.3-201ENST00000611521 109 ntBASIC3.12□□□□□ -1.91
CLTCL1P53675 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.12□□□□□ -1.91
CLTCL1P53675 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLTCL1P53675 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLTCL1P53675 U8.13-201ENST00000390842 128 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.11□□□□□ -1.91
CLTCL1P53675 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CLTCL1P53675 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.11□□□□□ -1.91
CLTCL1P53675 VN1R7P-201ENST00000619242 903 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 SNORA50A-202ENST00000629536 136 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 AC006378.2-201ENST00000623178 2476 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLTCL1P53675 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AC007390.1-201ENST00000415722 356 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.11□□□□□ -1.91
CLTCL1P53675 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.11□□□□□ -1.91
CLTCL1P53675 RPS27P5-201ENST00000444247 244 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.11□□□□□ -1.91
CLTCL1P53675 SEPT7P6-201ENST00000469999 1143 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.11□□□□□ -1.91
CLTCL1P53675 AC021733.2-201ENST00000518830 497 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.11□□□□□ -1.91
CLTCL1P53675 AC135628.1-201ENST00000568867 534 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.11□□□□□ -1.91
CLTCL1P53675 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.11□□□□□ -1.91
CLTCL1P53675 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.11□□□□□ -1.91
CLTCL1P53675 U6.98-201ENST00000637157 84 ntBASIC3.11□□□□□ -1.91
CLTCL1P53675 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLTCL1P53675 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.1□□□□□ -1.91
CLTCL1P53675 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.1□□□□□ -1.91
CLTCL1P53675 XIAPP3-201ENST00000312918 795 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 Y_RNA.226-201ENST00000364337 114 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.1□□□□□ -1.91
CLTCL1P53675 NDUFS5P3-201ENST00000450668 321 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 RN7SKP31-201ENST00000516354 278 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.1□□□□□ -1.91
CLTCL1P53675 OR5BN1P-201ENST00000532955 829 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 AK6P1-201ENST00000540219 478 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 BNIP3P8-201ENST00000597863 560 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.1□□□□□ -1.91
CLTCL1P53675 AC023813.4-201ENST00000607580 580 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.1□□□□□ -1.91
CLTCL1P53675 AC022336.2-201ENST00000568966 2538 ntBASIC3.1□□□□□ -1.91
CLTCL1P53675 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLTCL1P53675 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.09□□□□□ -1.91
CLTCL1P53675 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLTCL1P53675 SNORA67.3-201ENST00000384366 140 ntBASIC3.09□□□□□ -1.91
CLTCL1P53675 SNORA11.4-201ENST00000408823 129 ntBASIC3.09□□□□□ -1.91
CLTCL1P53675 VTA1P1-201ENST00000414044 866 ntBASIC3.09□□□□□ -1.91
CLTCL1P53675 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.09□□□□□ -1.91
CLTCL1P53675 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.09□□□□□ -1.91
CLTCL1P53675 AC245517.5-201ENST00000611529 162 ntBASIC3.09□□□□□ -1.91
CLTCL1P53675 CU459211.1-201ENST00000635667 749 ntBASIC3.09□□□□□ -1.91
CLTCL1P53675 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLTCL1P53675 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLTCL1P53675 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.09□□□□□ -1.91
CLTCL1P53675 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms