Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.66□□□□□ -1.82
GPC3P51654 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.66□□□□□ -1.82
GPC3P51654 DNAJC19P3-201ENST00000594491 331 ntBASIC3.66□□□□□ -1.82
GPC3P51654 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.66□□□□□ -1.82
GPC3P51654 AL162713.1-201ENST00000604480 262 ntBASIC3.66□□□□□ -1.82
GPC3P51654 AL365503.1-201ENST00000605247 905 ntBASIC3.66□□□□□ -1.82
GPC3P51654 AC073657.2-201ENST00000605661 303 ntBASIC3.66□□□□□ -1.82
GPC3P51654 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GPC3P51654 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.66□□□□□ -1.82
GPC3P51654 AL109620.1-201ENST00000618738 1197 ntBASIC3.66□□□□□ -1.82
GPC3P51654 AC068880.4-201ENST00000623082 495 ntBASIC3.66□□□□□ -1.82
GPC3P51654 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.66□□□□□ -1.82
GPC3P51654 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GPC3P51654 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.66□□□□□ -1.82
GPC3P51654 PWAR6-201ENST00000552334 4618 ntBASIC3.66□□□□□ -1.82
GPC3P51654 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
GPC3P51654 RNU6-582P-201ENST00000362989 107 ntBASIC3.65□□□□□ -1.83
GPC3P51654 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.65□□□□□ -1.83
GPC3P51654 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.65□□□□□ -1.83
GPC3P51654 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AL024474.1-201ENST00000404655 591 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.65□□□□□ -1.83
GPC3P51654 RPS15AP6-201ENST00000420703 385 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
GPC3P51654 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.65□□□□□ -1.83
GPC3P51654 ATP5C1P1-201ENST00000441945 895 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.65□□□□□ -1.83
GPC3P51654 AC010401.1-201ENST00000463867 348 ntBASIC3.65□□□□□ -1.83
GPC3P51654 RPS23P3-201ENST00000470993 430 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.65□□□□□ -1.83
GPC3P51654 AC108078.3-201ENST00000502633 489 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.65□□□□□ -1.83
GPC3P51654 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.65□□□□□ -1.83
GPC3P51654 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 MIR5004-201ENST00000579078 107 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.65□□□□□ -1.83
GPC3P51654 AC005000.2-201ENST00000605468 310 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.65□□□□□ -1.83
GPC3P51654 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.65□□□□□ -1.83
GPC3P51654 AL356321.1-201ENST00000621360 228 ntBASIC3.65□□□□□ -1.83
GPC3P51654 SNORA50A-202ENST00000629536 136 ntBASIC3.65□□□□□ -1.83
GPC3P51654 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
GPC3P51654 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 AL645568.2-201ENST00000432815 1337 ntBASIC3.65□□□□□ -1.83
GPC3P51654 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GPC3P51654 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.65□□□□□ -1.83
GPC3P51654 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GPC3P51654 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC3P51654 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
GPC3P51654 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC3P51654 SNORD116-23-201ENST00000384645 92 ntBASIC3.64□□□□□ -1.83
GPC3P51654 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.64□□□□□ -1.83
GPC3P51654 RNU6-712P-201ENST00000410558 100 ntBASIC3.64□□□□□ -1.83
GPC3P51654 HMGB3P23-201ENST00000414981 585 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL356968.1-201ENST00000416622 474 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC3P51654 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.64□□□□□ -1.83
GPC3P51654 MTCO2P1-201ENST00000424648 477 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC005345.1-201ENST00000431868 217 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC3P51654 AC006028.1-201ENST00000438379 402 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC241584.1-201ENST00000438469 1241 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.64□□□□□ -1.83
GPC3P51654 PTGES3P5-201ENST00000455109 434 ntBASIC3.64□□□□□ -1.83
GPC3P51654 PABPC1P3-201ENST00000469174 459 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC091860.1-201ENST00000505723 432 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC105914.1-201ENST00000511798 226 ntBASIC3.64□□□□□ -1.83
GPC3P51654 RNU6-885P-201ENST00000516607 104 ntBASIC3.64□□□□□ -1.83
GPC3P51654 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
GPC3P51654 NDUFB9P3-201ENST00000521269 501 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
GPC3P51654 GTF2IP8-201ENST00000560687 584 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC087481.2-201ENST00000565492 330 ntBASIC3.64□□□□□ -1.83
GPC3P51654 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 AC006116.7-201ENST00000590141 756 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL160281.1-201ENST00000605307 311 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC055876.5-201ENST00000605667 259 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AC011816.2-201ENST00000607089 556 ntBASIC3.64□□□□□ -1.83
GPC3P51654 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.64□□□□□ -1.83
GPC3P51654 AL360181.4-201ENST00000621752 134 ntBASIC3.64□□□□□ -1.83
GPC3P51654 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC3P51654 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
GPC3P51654 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
GPC3P51654 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.64□□□□□ -1.83
GPC3P51654 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
GPC3P51654 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
GPC3P51654 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
GPC3P51654 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
GPC3P51654 RNU1-70P-201ENST00000362618 164 ntBASIC3.63□□□□□ -1.83
GPC3P51654 RNA5SP374-201ENST00000362939 125 ntBASIC3.63□□□□□ -1.83
GPC3P51654 RNU6-839P-201ENST00000363347 108 ntBASIC3.63□□□□□ -1.83
GPC3P51654 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms