Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 HMGB1P19-201ENST00000517578 577 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 RPL12P22-201ENST00000519073 490 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC106038.2-201ENST00000520706 568 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC239860.2-201ENST00000525886 270 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL15A1P39059 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.67□□□□□ -1.66
COL15A1P39059 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.67□□□□□ -1.66
COL15A1P39059 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 RPL21P12-201ENST00000559810 515 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 EIF5A2P1-201ENST00000564027 460 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 RN7SKP299-201ENST00000606679 301 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.67□□□□□ -1.66
COL15A1P39059 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC231657.1-201ENST00000624313 397 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC079228.1-201ENST00000624774 1049 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 AC099063.3-201ENST00000642066 185 ntBASIC4.67□□□□□ -1.66
COL15A1P39059 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL15A1P39059 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL15A1P39059 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.67□□□□□ -1.66
COL15A1P39059 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.67□□□□□ -1.66
COL15A1P39059 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL15A1P39059 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.67□□□□□ -1.66
COL15A1P39059 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL15A1P39059 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL15A1P39059 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
COL15A1P39059 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL15A1P39059 RNU6-500P-201ENST00000362349 107 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 MIR506-201ENST00000384998 124 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 RNA5SP424-201ENST00000390988 115 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL15A1P39059 RPL23AP29-201ENST00000397284 453 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 DSTNP4-201ENST00000399472 474 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.66□□□□□ -1.66
COL15A1P39059 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.66□□□□□ -1.66
COL15A1P39059 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.66□□□□□ -1.66
COL15A1P39059 MTND2P20-201ENST00000440805 661 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.66□□□□□ -1.66
COL15A1P39059 RBMY2UP-201ENST00000453474 324 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 RPL18AP17-201ENST00000455326 198 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC108078.3-201ENST00000502633 489 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 MTCYBP17-201ENST00000503579 789 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 MTATP6P22-201ENST00000507369 598 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 LTV1P1-201ENST00000510683 1237 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 GMPSP1-201ENST00000514075 579 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 RN7SKP57-201ENST00000517248 293 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 SUMO2P20-201ENST00000520803 283 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 AC008011.1-201ENST00000545989 227 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 HMGB3P26-201ENST00000560051 582 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.66□□□□□ -1.66
COL15A1P39059 AC103987.3-201ENST00000582071 292 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AP001981.2-201ENST00000603241 418 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC083899.3-201ENST00000603413 594 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 HSPE1P14-201ENST00000605812 302 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AC009237.17-201ENST00000618111 748 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.66□□□□□ -1.66
COL15A1P39059 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.66□□□□□ -1.66
COL15A1P39059 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
COL15A1P39059 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL15A1P39059 MTCO1P14-201ENST00000441695 1559 ntBASIC4.66□□□□□ -1.66
COL15A1P39059 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COL15A1P39059 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.66□□□□□ -1.66
COL15A1P39059 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL15A1P39059 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL15A1P39059 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL15A1P39059 AC007685.1-201ENST00000329806 452 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
COL15A1P39059 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.65□□□□□ -1.66
COL15A1P39059 RPL7P8-201ENST00000411964 730 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.65□□□□□ -1.66
COL15A1P39059 AC005326.1-201ENST00000429197 123 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.65□□□□□ -1.66
COL15A1P39059 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.65□□□□□ -1.66
COL15A1P39059 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.65□□□□□ -1.66
COL15A1P39059 MTCO1P48-201ENST00000448024 1096 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.65□□□□□ -1.66
COL15A1P39059 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
COL15A1P39059 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.65□□□□□ -1.66
COL15A1P39059 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.65□□□□□ -1.66
COL15A1P39059 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.65□□□□□ -1.66
COL15A1P39059 MTND4P2-201ENST00000507767 1203 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 MTCYBP43-201ENST00000513621 740 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 RNU6-583P-201ENST00000516012 92 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 Y_RNA.695-201ENST00000516715 107 ntBASIC4.65□□□□□ -1.66
COL15A1P39059 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms