Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.19□□□□□ -1.9
RETP07949 AC091826.1-201ENST00000514065 313 ntBASIC3.19□□□□□ -1.9
RETP07949 SNORA76.2-201ENST00000517095 137 ntBASIC3.19□□□□□ -1.9
RETP07949 AC009812.2-201ENST00000517657 457 ntBASIC3.19□□□□□ -1.9
RETP07949 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.19□□□□□ -1.9
RETP07949 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.19□□□□□ -1.9
RETP07949 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.19□□□□□ -1.9
RETP07949 AC239860.2-201ENST00000525886 270 ntBASIC3.19□□□□□ -1.9
RETP07949 OR4R2P-201ENST00000530815 597 ntBASIC3.19□□□□□ -1.9
RETP07949 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.19□□□□□ -1.9
RETP07949 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.19□□□□□ -1.9
RETP07949 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.19□□□□□ -1.9
RETP07949 MIR4506-201ENST00000584693 77 ntBASIC3.19□□□□□ -1.9
RETP07949 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.19□□□□□ -1.9
RETP07949 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 IGHVIII-44-202ENST00000636235 289 ntBASIC3.19□□□□□ -1.9
RETP07949 AC010149.2-201ENST00000637608 315 ntBASIC3.19□□□□□ -1.9
RETP07949 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
RETP07949 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.19□□□□□ -1.9
RETP07949 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RETP07949 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RETP07949 AC010733.2-201ENST00000589496 5702 ntBASIC3.18□□□□□ -1.9
RETP07949 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RETP07949 AL359693.1-201ENST00000614959 2407 ntBASIC3.18□□□□□ -1.9
RETP07949 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RETP07949 RNU6-792P-201ENST00000363490 107 ntBASIC3.18□□□□□ -1.9
RETP07949 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 HSPE1P1-201ENST00000421494 318 ntBASIC3.18□□□□□ -1.9
RETP07949 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC3.18□□□□□ -1.9
RETP07949 AL121882.1-201ENST00000422893 417 ntBASIC3.18□□□□□ -1.9
RETP07949 AL035407.1-201ENST00000429211 571 ntBASIC3.18□□□□□ -1.9
RETP07949 YWHAZP8-201ENST00000436935 731 ntBASIC3.18□□□□□ -1.9
RETP07949 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.18□□□□□ -1.9
RETP07949 snoU13.7-201ENST00000459220 104 ntBASIC3.18□□□□□ -1.9
RETP07949 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.18□□□□□ -1.9
RETP07949 MTCO3P35-201ENST00000485582 781 ntBASIC3.18□□□□□ -1.9
RETP07949 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.18□□□□□ -1.9
RETP07949 AC005351.1-201ENST00000511152 786 ntBASIC3.18□□□□□ -1.9
RETP07949 RNA5SP367-201ENST00000516557 118 ntBASIC3.18□□□□□ -1.9
RETP07949 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.18□□□□□ -1.9
RETP07949 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
RETP07949 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 AL442163.2-201ENST00000553912 710 ntBASIC3.18□□□□□ -1.9
RETP07949 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 AC079148.1-201ENST00000565944 819 ntBASIC3.18□□□□□ -1.9
RETP07949 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.18□□□□□ -1.9
RETP07949 MAGOH2P-202ENST00000584384 429 ntBASIC3.18□□□□□ -1.9
RETP07949 AC073569.3-201ENST00000619055 682 ntBASIC3.18□□□□□ -1.9
RETP07949 SNORD39.4-201ENST00000620099 78 ntBASIC3.18□□□□□ -1.9
RETP07949 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RETP07949 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RETP07949 MTCO1P18-201ENST00000455518 1419 ntBASIC3.18□□□□□ -1.9
RETP07949 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.18□□□□□ -1.9
RETP07949 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RETP07949 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 XPOTP1-201ENST00000443317 2398 ntBASIC3.17□□□□□ -1.9
RETP07949 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.17□□□□□ -1.9
RETP07949 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RETP07949 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 ELL2P4-201ENST00000446870 1376 ntBASIC3.17□□□□□ -1.9
RETP07949 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 ENSAP3-201ENST00000312710 333 ntBASIC3.17□□□□□ -1.9
RETP07949 RNU4-82P-201ENST00000362443 140 ntBASIC3.17□□□□□ -1.9
RETP07949 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.17□□□□□ -1.9
RETP07949 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 RNU6-481P-201ENST00000384194 107 ntBASIC3.17□□□□□ -1.9
RETP07949 RPS3AP26-201ENST00000398259 784 ntBASIC3.17□□□□□ -1.9
RETP07949 AL355379.1-201ENST00000405542 640 ntBASIC3.17□□□□□ -1.9
RETP07949 PTGES3P2-201ENST00000407942 482 ntBASIC3.17□□□□□ -1.9
RETP07949 EEF1A1P41-201ENST00000414667 207 ntBASIC3.17□□□□□ -1.9
RETP07949 NUP35P2-201ENST00000416748 943 ntBASIC3.17□□□□□ -1.9
RETP07949 SDCBPP3-201ENST00000419629 891 ntBASIC3.17□□□□□ -1.9
RETP07949 AC006960.1-201ENST00000419980 153 ntBASIC3.17□□□□□ -1.9
RETP07949 AC012065.2-201ENST00000421295 375 ntBASIC3.17□□□□□ -1.9
RETP07949 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
RETP07949 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.17□□□□□ -1.9
RETP07949 ETF1P3-201ENST00000430422 1160 ntBASIC3.17□□□□□ -1.9
RETP07949 AC022018.1-201ENST00000430685 241 ntBASIC3.17□□□□□ -1.9
RETP07949 AL121890.1-201ENST00000435457 205 ntBASIC3.17□□□□□ -1.9
RETP07949 AC000041.1-201ENST00000439655 175 ntBASIC3.17□□□□□ -1.9
RETP07949 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.17□□□□□ -1.9
RETP07949 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.17□□□□□ -1.9
RETP07949 Z99127.3-201ENST00000448158 395 ntBASIC3.17□□□□□ -1.9
RETP07949 ELOCP23-201ENST00000452014 332 ntBASIC3.17□□□□□ -1.9
RETP07949 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.17□□□□□ -1.9
RETP07949 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RETP07949 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms