Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RN7SKP32-201ENST00000410167 303 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR1AO95602 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR1AO95602 MIR6766-201ENST00000622641 72 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 MIR1291-201ENST00000627649 87 ntBASIC3.39□□□□□ -1.87
POLR1AO95602 AC005539.1-201ENST00000443768 1479 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
POLR1AO95602 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
POLR1AO95602 RNU1-91P-201ENST00000364746 163 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
POLR1AO95602 ATG3P1-201ENST00000419507 911 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 AP001086.1-201ENST00000494882 321 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.38□□□□□ -1.87
POLR1AO95602 AC004486.1-201ENST00000546846 233 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 AC026464.5-201ENST00000562497 722 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 AL160237.3-201ENST00000604114 1013 ntBASIC3.38□□□□□ -1.87
POLR1AO95602 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1AO95602 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR1AO95602 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
POLR1AO95602 RNU6-14P-201ENST00000384630 106 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 CFTRP1-201ENST00000456646 183 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 AC091544.1-201ENST00000484702 348 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1AO95602 AC112673.1-201ENST00000513168 575 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR1AO95602 AC023043.2-201ENST00000589678 1026 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 VN1R7P-201ENST00000619242 903 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1AO95602 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
POLR1AO95602 AC009487.2-201ENST00000420969 6821 ntBASIC3.37□□□□□ -1.87
POLR1AO95602 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1AO95602 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
POLR1AO95602 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1AO95602 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
POLR1AO95602 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
POLR1AO95602 RNA5SP88-201ENST00000365560 109 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 MIR142-201ENST00000384835 87 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 MTCO2P17-201ENST00000424336 677 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 Z82205.1-201ENST00000428456 297 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 OR9N1P-201ENST00000491296 333 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1AO95602 AC026436.1-201ENST00000510537 270 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 OR5D17P-201ENST00000531492 978 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1AO95602 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR1AO95602 AC023813.4-201ENST00000607580 580 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1AO95602 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1AO95602 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.36□□□□□ -1.87
POLR1AO95602 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR1AO95602 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.36□□□□□ -1.87
POLR1AO95602 NPM1P10-201ENST00000398310 865 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 RPS24P8-201ENST00000431490 402 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1AO95602 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 AC008126.1-201ENST00000549019 480 ntBASIC3.36□□□□□ -1.87
POLR1AO95602 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR1AO95602 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1AO95602 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.36□□□□□ -1.87
POLR1AO95602 AL133412.1-201ENST00000380194 2992 ntBASIC3.35□□□□□ -1.87
POLR1AO95602 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1AO95602 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1AO95602 AC006378.2-201ENST00000623178 2476 ntBASIC3.35□□□□□ -1.87
POLR1AO95602 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1AO95602 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1AO95602 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1AO95602 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1AO95602 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.35□□□□□ -1.87
POLR1AO95602 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1AO95602 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1AO95602 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.35□□□□□ -1.87
POLR1AO95602 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
POLR1AO95602 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
POLR1AO95602 Z99496.1-201ENST00000469424 1477 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 RNA5SP456-201ENST00000364002 114 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1AO95602 GOLGA5P1-201ENST00000507317 980 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 AK6P1-201ENST00000540219 478 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 GNAI2P1-201ENST00000541815 315 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 AC010198.2-201ENST00000550612 259 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1AO95602 ABI1P1-201ENST00000603375 1120 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
POLR1AO95602 AP001005.3-201ENST00000622049 129 ntBASIC3.34□□□□□ -1.87
POLR1AO95602 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.34□□□□□ -1.87
POLR1AO95602 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.34□□□□□ -1.88
POLR1AO95602 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
POLR1AO95602 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
POLR1AO95602 RNU1-17P-201ENST00000363022 152 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 SPA17P1-201ENST00000416656 452 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.33□□□□□ -1.88
POLR1AO95602 RPL39P40-201ENST00000445481 146 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 HMGB1P48-201ENST00000446155 598 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AC117522.2-201ENST00000510049 657 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 RNA5SP402-201ENST00000517148 110 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
POLR1AO95602 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.33□□□□□ -1.88
POLR1AO95602 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.33□□□□□ -1.88
POLR1AO95602 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms