Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 MTND5P28-201ENST00000438005 1594 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC073325.2-201ENST00000339545 159 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SEMA3DO95025 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.92□□□□□ -1.94
SEMA3DO95025 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SEMA3DO95025 RNVU1-14-201ENST00000384770 164 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 RPL31P1-201ENST00000398116 372 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 RNU6-77P-201ENST00000410554 91 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AL606495.1-201ENST00000422100 813 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.92□□□□□ -1.94
SEMA3DO95025 AC109583.1-201ENST00000432156 268 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.92□□□□□ -1.94
SEMA3DO95025 AL358232.1-201ENST00000448030 501 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 RPS24P6-201ENST00000452670 400 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 SYPL1P1-201ENST00000473622 768 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC087879.1-201ENST00000474343 374 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 RN7SL20P-201ENST00000488827 297 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC074250.1-201ENST00000511117 192 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.92□□□□□ -1.94
SEMA3DO95025 RN7SKP43-201ENST00000516173 320 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 RNU6-416P-201ENST00000516265 103 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.92□□□□□ -1.94
SEMA3DO95025 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.92□□□□□ -1.94
SEMA3DO95025 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.92□□□□□ -1.94
SEMA3DO95025 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
SEMA3DO95025 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.92□□□□□ -1.94
SEMA3DO95025 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.92□□□□□ -1.94
SEMA3DO95025 AC055876.1-202ENST00000567053 138 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 MIR8084-201ENST00000614105 89 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC105227.2-201ENST00000615075 605 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC022509.4-201ENST00000621404 572 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC006963.1-201ENST00000624003 1052 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.92□□□□□ -1.94
SEMA3DO95025 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.92□□□□□ -1.94
SEMA3DO95025 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SEMA3DO95025 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SEMA3DO95025 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEMA3DO95025 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEMA3DO95025 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.91□□□□□ -1.94
SEMA3DO95025 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEMA3DO95025 RNU6-1151P-201ENST00000384684 107 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 SNORD65C-201ENST00000390962 71 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 USP9YP19-201ENST00000412165 485 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.91□□□□□ -1.94
SEMA3DO95025 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.91□□□□□ -1.94
SEMA3DO95025 SAR1AP4-201ENST00000429225 591 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 RPS7P2-201ENST00000435134 607 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AL096803.2-201ENST00000450032 677 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 HMGB1P15-201ENST00000453854 435 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.91□□□□□ -1.94
SEMA3DO95025 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 RNA5SP76-201ENST00000516277 87 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC104986.1-201ENST00000517978 436 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 IGJP1-201ENST00000522682 475 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SEMA3DO95025 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.91□□□□□ -1.94
SEMA3DO95025 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 MIR1254-2-201ENST00000579553 63 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC006116.7-201ENST00000590141 756 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.91□□□□□ -1.94
SEMA3DO95025 VN1R88P-201ENST00000596787 292 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 BNIP3P33-201ENST00000598912 569 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AL020997.3-201ENST00000602843 359 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.91□□□□□ -1.94
SEMA3DO95025 AC069234.5-201ENST00000611056 416 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC004696.1-201ENST00000614345 607 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC106730.3-201ENST00000624568 641 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AP000676.4-201ENST00000624659 623 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 AC010733.2-201ENST00000589496 5702 ntBASIC2.91□□□□□ -1.94
SEMA3DO95025 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SEMA3DO95025 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.9□□□□□ -1.94
SEMA3DO95025 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SEMA3DO95025 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.9□□□□□ -1.94
SEMA3DO95025 MTND5P1-201ENST00000445440 1375 ntBASIC2.9□□□□□ -1.94
SEMA3DO95025 AC025263.3-201ENST00000622965 1396 ntBASIC2.9□□□□□ -1.94
SEMA3DO95025 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
SEMA3DO95025 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.94
SEMA3DO95025 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 RPL23AP57-201ENST00000332361 466 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SEMA3DO95025 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.9□□□□□ -1.95
SEMA3DO95025 SNORD67-201ENST00000390833 111 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC246680.2-201ENST00000422106 389 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 RPL17P35-201ENST00000432217 549 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.9□□□□□ -1.95
SEMA3DO95025 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.9□□□□□ -1.95
SEMA3DO95025 snoU13.24-201ENST00000458998 104 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 286.6 ms