Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNA5SP154-201ENST00000516193 111 ntBASIC3.59□□□□□ -1.83
PRKNO60260 RNU1-45P-201ENST00000517191 141 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC023632.4-201ENST00000517783 191 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC104986.1-201ENST00000517978 436 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 OR4A45P-201ENST00000529954 901 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 AP000873.5-201ENST00000533906 236 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 OR6C7P-201ENST00000547875 934 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC069240.1-201ENST00000548774 375 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AC087499.8-201ENST00000578406 226 ntBASIC3.59□□□□□ -1.83
PRKNO60260 MIR3611-201ENST00000584484 83 ntBASIC3.59□□□□□ -1.83
PRKNO60260 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.59□□□□□ -1.83
PRKNO60260 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 AC068790.2-201ENST00000602601 557 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC010680.3-201ENST00000604215 520 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AL139286.1-201ENST00000604465 483 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC115621.1-201ENST00000604653 858 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AP000254.1-201ENST00000609934 520 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.59□□□□□ -1.83
PRKNO60260 AC079684.1-201ENST00000621405 437 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AL356121.2-201ENST00000624715 780 ntBASIC3.59□□□□□ -1.83
PRKNO60260 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
PRKNO60260 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PRKNO60260 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
PRKNO60260 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PRKNO60260 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKNO60260 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 SNORD74.4-201ENST00000364129 80 ntBASIC3.58□□□□□ -1.84
PRKNO60260 RNU6-777P-201ENST00000364265 104 ntBASIC3.58□□□□□ -1.84
PRKNO60260 RHOT1P2-201ENST00000366423 333 ntBASIC3.58□□□□□ -1.84
PRKNO60260 OR5H15-201ENST00000383696 930 ntBASIC3.58□□□□□ -1.84
PRKNO60260 RNY3P10-201ENST00000384764 102 ntBASIC3.58□□□□□ -1.84
PRKNO60260 MTCYBP36-201ENST00000404146 440 ntBASIC3.58□□□□□ -1.84
PRKNO60260 RN7SKP202-201ENST00000410439 330 ntBASIC3.58□□□□□ -1.84
PRKNO60260 RN7SKP159-201ENST00000410657 292 ntBASIC3.58□□□□□ -1.84
PRKNO60260 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 AC109780.2-201ENST00000413467 845 ntBASIC3.58□□□□□ -1.84
PRKNO60260 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.58□□□□□ -1.84
PRKNO60260 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AC017015.1-201ENST00000477387 286 ntBASIC3.58□□□□□ -1.84
PRKNO60260 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 FAM172BP-201ENST00000487497 1089 ntBASIC3.58□□□□□ -1.84
PRKNO60260 HMGB1P21-201ENST00000502313 581 ntBASIC3.58□□□□□ -1.84
PRKNO60260 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AC104057.1-201ENST00000515547 497 ntBASIC3.58□□□□□ -1.84
PRKNO60260 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 RFPL1S-203ENST00000539579 330 ntBASIC3.58□□□□□ -1.84
PRKNO60260 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.58□□□□□ -1.84
PRKNO60260 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 HSPE1P3-201ENST00000559254 309 ntBASIC3.58□□□□□ -1.84
PRKNO60260 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.58□□□□□ -1.84
PRKNO60260 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 BNIP3P23-201ENST00000599655 511 ntBASIC3.58□□□□□ -1.84
PRKNO60260 AC068276.1-201ENST00000605793 379 ntBASIC3.58□□□□□ -1.84
PRKNO60260 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.58□□□□□ -1.84
PRKNO60260 AC008121.2-201ENST00000614647 523 ntBASIC3.58□□□□□ -1.84
PRKNO60260 AL139089.1-201ENST00000620372 975 ntBASIC3.58□□□□□ -1.84
PRKNO60260 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 AC025048.6-202ENST00000627667 438 ntBASIC3.58□□□□□ -1.84
PRKNO60260 LINC00561-201ENST00000565815 2738 ntBASIC3.58□□□□□ -1.84
PRKNO60260 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRKNO60260 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PRKNO60260 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PRKNO60260 PNPT1P2-201ENST00000456768 2050 ntBASIC3.58□□□□□ -1.84
PRKNO60260 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.58□□□□□ -1.84
PRKNO60260 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKNO60260 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.57□□□□□ -1.84
PRKNO60260 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PRKNO60260 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PRKNO60260 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms