Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 GAS5-AS1-201ENST00000602767 694 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006386.1-201ENST00000619436 415 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC022149.2-201ENST00000621061 203 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR4496-201ENST00000635896 61 ntBASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NEDD8-MDP1E9PL57 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC109315.1-201ENST00000584143 1347 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCO3P1-205ENST00000422088 832 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006028.1-201ENST00000438379 402 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL23AP76-201ENST00000441860 458 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007327.1-201ENST00000447461 264 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AL034418.1-201ENST00000448675 860 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC115115.1-201ENST00000449927 248 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC104073.1-201ENST00000451988 151 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC097262.1-201ENST00000452559 548 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 CFTRP1-201ENST00000456646 183 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 MTCO3P2-201ENST00000457365 171 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL5P24-201ENST00000463742 885 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC078785.3-201ENST00000476607 425 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 TMED11P-201ENST00000479478 690 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 RNF138P1-201ENST00000502765 546 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC112198.1-201ENST00000505369 1220 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-1225P-201ENST00000516336 65 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC027309.2-201ENST00000520566 192 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 OR8L1P-201ENST00000534005 955 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC090502.2-201ENST00000549267 280 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AADACP1-206ENST00000561502 1193 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 SULT1C2P1-202ENST00000562418 459 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AP001269.3-201ENST00000588718 329 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 CKS1BP3-201ENST00000600888 237 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC021749.1-201ENST00000604322 607 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 YPEL5P2-201ENST00000605553 359 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC107075.1-201ENST00000613695 314 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC068722.2-201ENST00000618734 544 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AC006963.1-201ENST00000624003 1052 ntBASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.45□□□□□ -1.86
NEDD8-MDP1E9PL57 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AP000568.1-201ENST00000282964 442 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 RNU6-560P-201ENST00000364007 108 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL23AP47-201ENST00000408017 460 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 Z92545.1-201ENST00000411782 234 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 HMGN1P24-201ENST00000412282 298 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC063979.1-201ENST00000415539 377 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 RPL31P45-201ENST00000419532 356 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 MRPS36P1-201ENST00000421291 307 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 OR51AB1P-201ENST00000429046 620 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 USP9YP31-201ENST00000431405 881 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC084290.1-201ENST00000434995 374 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC004022.1-201ENST00000447766 1066 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AL136126.1-201ENST00000473603 402 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 AC108734.3-201ENST00000481241 1165 ntBASIC3.44□□□□□ -1.86
NEDD8-MDP1E9PL57 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms