Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC005005.4-201ENST00000623789 16698 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RIOK3P1-201ENST00000418778 1528 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 MIR937-201ENST00000401271 86 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AL606923.1-201ENST00000406616 190 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RN7SKP213-201ENST00000410746 298 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC009161.1-201ENST00000417306 376 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RPL21P66-201ENST00000426566 466 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AL732292.1-201ENST00000426692 226 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 ZNF863P-201ENST00000426746 417 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AL121601.2-201ENST00000438019 707 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RPL26P6-201ENST00000440913 438 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RPS11P7-201ENST00000442125 465 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 SNRPFP3-201ENST00000457792 225 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RNU6-953P-201ENST00000459154 107 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AP000942.1-201ENST00000463969 747 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 RPL7L1P8-201ENST00000469911 741 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 HSPE1P6-201ENST00000479457 291 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 EIF4EP3-201ENST00000498782 656 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC023141.12-201ENST00000512399 199 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC008549.1-201ENST00000512900 643 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC046134.1-201ENST00000514454 666 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC174048.1-201ENST00000603389 144 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AC104763.2-201ENST00000604179 382 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AP001330.4-201ENST00000604350 154 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AP001521.2-201ENST00000608772 546 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 AP005264.7-201ENST00000625003 745 ntBASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRAIPQ9BWF2 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 OR4G1P-203ENST00000641984 1631 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC067945.1-201ENST00000342609 618 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 SNORA51.2-201ENST00000364595 132 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC068287.1-201ENST00000430283 295 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 GSTM5P1-201ENST00000434751 660 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 RPL21P133-201ENST00000443666 476 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 TRBV1-201ENST00000476502 284 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC093270.2-201ENST00000486157 792 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 RPS27AP13-201ENST00000498403 237 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC104806.1-201ENST00000508720 308 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC114786.4-201ENST00000508771 728 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 RNU6-677P-201ENST00000516914 101 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 ADI1P3-201ENST00000549509 470 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AP002826.1-201ENST00000608835 315 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC233309.1-201ENST00000619522 751 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC068831.8-201ENST00000620171 435 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AL023881.1-201ENST00000621088 301 ntBASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.9□□□□□ -1.46
TRAIPQ9BWF2 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRAIPQ9BWF2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.47
TRAIPQ9BWF2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.9□□□□□ -1.47
TRAIPQ9BWF2 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
TRAIPQ9BWF2 AC009643.2-201ENST00000603543 1448 ntBASIC5.9□□□□□ -1.47
TRAIPQ9BWF2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
TRAIPQ9BWF2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.89□□□□□ -1.47
TRAIPQ9BWF2 SDAD1P2-201ENST00000441308 2028 ntBASIC5.89□□□□□ -1.47
TRAIPQ9BWF2 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
TRAIPQ9BWF2 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
TRAIPQ9BWF2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms