Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC008739.3-201ENST00000603262 127 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AL596327.1-201ENST00000603629 213 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AP001521.1-201ENST00000609150 300 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC108747.1-201ENST00000609508 535 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC128687.2-201ENST00000609657 566 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC116165.2-201ENST00000616705 206 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC116563.2-201ENST00000624751 535 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 ZNF285B-201ENST00000561698 1767 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 ZNF37BP-203ENST00000452306 1352 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 AC022031.1-201ENST00000585985 2593 ntBASIC4.49□□□□□ -1.69
CCDC17Q96LX7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC17Q96LX7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 MTCO1P23-201ENST00000415223 1526 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 RNU4-91P-201ENST00000364778 135 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC104651.1-201ENST00000427559 735 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC010881.1-201ENST00000433830 235 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 TRGVB-201ENST00000453257 471 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 APOOP2-201ENST00000461561 539 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 RPL21P71-201ENST00000465598 459 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 RPL7L1P8-201ENST00000469911 741 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC109927.2-201ENST00000506416 303 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC026403.1-201ENST00000518938 295 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 IGHV3-32-201ENST00000519182 355 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC022695.1-201ENST00000522089 237 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 DEFB131D-201ENST00000526803 184 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AP000790.1-201ENST00000528891 737 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC069240.1-201ENST00000548774 375 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC074029.1-201ENST00000552531 1044 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC245505.1-201ENST00000556398 224 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 HMGB3P26-201ENST00000560051 582 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 HNRNPCP4-201ENST00000571636 900 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC136618.2-201ENST00000575091 400 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC053481.3-201ENST00000577881 843 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC008498.1-201ENST00000613012 531 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC067931.1-201ENST00000624190 671 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 MTND4P16-201ENST00000466108 1367 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 ASNSP1-201ENST00000518311 1939 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 IPO8P1-201ENST00000455509 3109 ntBASIC4.48□□□□□ -1.69
CCDC17Q96LX7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC17Q96LX7 AC092079.1-201ENST00000558620 1985 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 SNRPEP3-201ENST00000338402 276 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RNU6-657P-201ENST00000383904 107 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RNU6-723P-201ENST00000383973 107 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 SNORA5A-201ENST00000384111 134 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RNU6-348P-201ENST00000384386 107 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MTCYBP36-201ENST00000404146 440 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MTCO3P31-201ENST00000405526 789 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 NCSTNP1-201ENST00000406229 144 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RPS7P13-201ENST00000413955 498 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL512649.1-201ENST00000428997 581 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AL358232.1-201ENST00000448030 501 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RPL23AP15-201ENST00000450202 459 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC243772.1-201ENST00000451620 410 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 SUMO2P2-201ENST00000456482 255 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 HMGN1P11-201ENST00000508668 303 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 MTND4LP26-201ENST00000518144 282 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 DUXAP2-201ENST00000519198 589 ntBASIC4.47□□□□□ -1.69
CCDC17Q96LX7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC17Q96LX7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms