Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RAD23BP3-201ENST00000454157 1152 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC005229.2-201ENST00000456995 399 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RPL38P1-201ENST00000460914 211 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AP000942.1-201ENST00000463969 747 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC087312.1-201ENST00000471411 480 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RPS3AP14-201ENST00000483907 780 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL132838.2-201ENST00000492041 314 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC108022.1-201ENST00000493466 478 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC104164.2-201ENST00000496953 495 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC108064.1-201ENST00000513791 460 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RN7SKP46-201ENST00000515942 234 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 Y_RNA.704-201ENST00000516851 102 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO2P4-201ENST00000517968 247 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 MTND1P35-201ENST00000526739 508 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 OR5AP1P-201ENST00000529730 940 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC010200.2-201ENST00000605098 235 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL132765.2-201ENST00000610812 351 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AL713922.2-201ENST00000619384 716 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 AC007792.1-201ENST00000623023 402 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 MIR1321-201ENST00000637766 79 ntBASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
SH3RF3Q8TEJ3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-433P-201ENST00000363216 104 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-839P-201ENST00000363347 108 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RNU11-4P-201ENST00000391149 133 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 PPIAP31-201ENST00000405422 495 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 HMGB3P18-201ENST00000406327 590 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO2P12-201ENST00000427426 682 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO1P54-201ENST00000430139 712 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RPL12P46-201ENST00000436610 195 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AL451074.3-201ENST00000437709 472 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 PDSS1P2-201ENST00000449397 678 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 USP9YP12-201ENST00000450481 570 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RPS29P19-201ENST00000479709 171 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RPL39P36-201ENST00000490784 156 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC111193.1-201ENST00000504097 155 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RN7SKP31-201ENST00000516354 278 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC087808.1-201ENST00000520501 361 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC090151.1-201ENST00000520784 730 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 CBX3P5-201ENST00000552017 521 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC018552.3-201ENST00000567416 561 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC034268.2-201ENST00000571784 482 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC015917.1-201ENST00000579654 510 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC107214.2-201ENST00000608204 634 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 MIR3662-201ENST00000637030 95 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 RLIMP1-201ENST00000339626 1680 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC010300.1-201ENST00000600671 5134 ntBASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SH3RF3Q8TEJ3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.03□□□□□ -1.6
SH3RF3Q8TEJ3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms