Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 AP005212.3-201ENST00000619964 528 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 AC241585.2-209ENST00000638217 143 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NUBP1P53384 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NUBP1P53384 PIWIL3-204ENST00000533313 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.92□□□□□ -1.3
NUBP1P53384 AC016582.1-202ENST00000636341 2982 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
NUBP1P53384 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.92□□□□□ -1.3
NUBP1P53384 AC018529.3-201ENST00000624212 2254 ntBASIC6.92□□□□□ -1.3
NUBP1P53384 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NUBP1P53384 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC6.91□□□□□ -1.3
NUBP1P53384 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.91□□□□□ -1.3
NUBP1P53384 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 RN7SKP107-201ENST00000364157 290 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AL590635.1-201ENST00000406314 586 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AL354707.3-201ENST00000427308 331 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AC006026.2-201ENST00000457376 180 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 RN7SL39P-201ENST00000462264 297 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AC139453.3-201ENST00000493276 369 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 AC114781.3-201ENST00000512083 142 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 RNU6-58P-201ENST00000517143 103 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 CYCSP25-201ENST00000525280 316 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.91□□□□□ -1.3
NUBP1P53384 AC016256.1-201ENST00000547971 354 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AC090049.2-201ENST00000550377 109 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.91□□□□□ -1.3
NUBP1P53384 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC6.91□□□□□ -1.3
NUBP1P53384 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.91□□□□□ -1.3
NUBP1P53384 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.91□□□□□ -1.3
NUBP1P53384 AL591926.4-201ENST00000616895 298 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 AC105235.1-201ENST00000623208 1816 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 PHKBP1-201ENST00000450951 1951 ntBASIC6.91□□□□□ -1.3
NUBP1P53384 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC6.91□□□□□ -1.3
NUBP1P53384 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NUBP1P53384 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC6.91□□□□□ -1.3
NUBP1P53384 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC6.91□□□□□ -1.3
NUBP1P53384 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC6.9□□□□□ -1.3
NUBP1P53384 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.9□□□□□ -1.3
NUBP1P53384 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 AC026464.2-201ENST00000567834 2421 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
NUBP1P53384 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 RNPC3-208ENST00000533099 3641 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.9□□□□□ -1.3
NUBP1P53384 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 RNA5SP77-201ENST00000365394 120 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 SNORA29-201ENST00000384183 140 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 RNA5SP474-201ENST00000391234 90 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.9□□□□□ -1.3
NUBP1P53384 AC092798.1-201ENST00000458542 409 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 snoU109.2-201ENST00000459316 135 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 Y_RNA.694-201ENST00000516677 117 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.9□□□□□ -1.3
NUBP1P53384 AC090877.1-201ENST00000561418 344 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 AC061999.1-201ENST00000624454 177 ntBASIC6.9□□□□□ -1.3
NUBP1P53384 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
NUBP1P53384 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
NUBP1P53384 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC6.9□□□□□ -1.31
NUBP1P53384 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
NUBP1P53384 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.9□□□□□ -1.31
NUBP1P53384 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms