Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC008687.2-201ENST00000597865 520 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC012119.1-201ENST00000603184 222 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 AC018926.3-201ENST00000618841 406 ntBASIC2.26□□□□□ -2.05
HLA-DMBP28068 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-DMBP28068 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
HLA-DMBP28068 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC016716.1-201ENST00000265882 708 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 MIR22-201ENST00000362190 85 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 CUBN-201ENST00000377823 705 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 SNORA54-201ENST00000384281 123 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 SNORA51.12-201ENST00000384448 134 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 SNORD88.1-201ENST00000408684 91 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 U3.42-201ENST00000408746 214 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 RNU6-1077P-201ENST00000410506 102 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 YPEL5P1-201ENST00000419731 367 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 HSFY1P1-201ENST00000423928 1178 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 RPL36P19-201ENST00000430744 301 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC010301.1-201ENST00000473936 355 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 PRELID3BP6-201ENST00000503839 571 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 GMPSP1-201ENST00000514075 579 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 RN7SKP272-201ENST00000516988 232 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 RNU6-711P-201ENST00000517255 106 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 CIR1P1-201ENST00000524055 1133 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC022080.3-201ENST00000544433 482 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 NOP56P3-201ENST00000549457 385 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 EIF5A2P1-201ENST00000564027 460 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC011471.1-201ENST00000585766 187 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 BDH2P1-201ENST00000602288 736 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AF131215.7-201ENST00000602443 707 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC124312.4-201ENST00000605533 310 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC135507.2-201ENST00000612443 309 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 CR589904.2-201ENST00000612533 440 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC068831.7-201ENST00000616954 363 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC139713.2-210ENST00000641741 992 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-DMBP28068 AC092435.3-201ENST00000565538 3654 ntBASIC2.25□□□□□ -2.05
HLA-DMBP28068 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HLA-DMBP28068 GABRG2-229ENST00000641017 3628 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 MIR181B1-201ENST00000385240 110 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPL19P1-201ENST00000411635 428 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPS3AP9-201ENST00000417027 792 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 SSXP9-201ENST00000417503 292 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC022018.1-201ENST00000430685 241 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPL23AP20-201ENST00000447965 421 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC233982.1-201ENST00000451247 436 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 GSTA11P-201ENST00000452866 669 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC117440.1-201ENST00000474107 571 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPS17P11-201ENST00000474297 293 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPL23AP11-201ENST00000475260 469 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RPS27AP9-201ENST00000477681 438 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DMBP28068 MTCYBP37-201ENST00000510642 1133 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 RNU6-760P-201ENST00000516078 97 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 SNORD84-203ENST00000584275 78 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms