Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGA1P17096 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGA1P17096 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
HMGA1P17096 U3.15-201ENST00000365398 212 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 RNU6-146P-201ENST00000384602 108 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 HMGB1P13-201ENST00000406019 642 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 OR51A3P-201ENST00000413596 924 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 PTP4A1P7-201ENST00000423476 514 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.32□□□□□ -2.04
HMGA1P17096 AL353093.1-201ENST00000441292 436 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGA1P17096 RPL7P5-201ENST00000471472 736 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 RPS26P21-201ENST00000475397 348 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 AC104090.1-201ENST00000506341 1171 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGA1P17096 OR4R2P-201ENST00000530815 597 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 OR4T1P-201ENST00000554933 911 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 AC007687.1-201ENST00000602704 304 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.32□□□□□ -2.04
HMGA1P17096 AL160394.1-201ENST00000624765 724 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.32□□□□□ -2.04
HMGA1P17096 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.32□□□□□ -2.04
HMGA1P17096 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGA1P17096 AC107021.2-201ENST00000567714 2095 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 RN7SKP32-201ENST00000410167 303 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 RANP7-201ENST00000418085 644 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.31□□□□□ -2.04
HMGA1P17096 Z98742.2-201ENST00000431564 187 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.31□□□□□ -2.04
HMGA1P17096 WASF1P1-201ENST00000447560 1131 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 FTH1P25-201ENST00000447665 469 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 NPM1P49-201ENST00000448027 714 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AP000705.1-201ENST00000454567 350 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 MTCO3P11-201ENST00000455103 774 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AC008571.1-201ENST00000467232 300 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 CCNHP1-201ENST00000513311 678 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 YWHAZP1-201ENST00000556286 722 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 MTCO3P24-201ENST00000572729 782 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 AL356575.1-201ENST00000603008 283 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AL392112.1-201ENST00000605115 829 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 AC009831.4-201ENST00000620744 325 ntBASIC2.31□□□□□ -2.04
HMGA1P17096 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.31□□□□□ -2.04
HMGA1P17096 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC2.31□□□□□ -2.04
HMGA1P17096 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HMGA1P17096 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGA1P17096 FRG1BP-201ENST00000278882 761 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 DEFA7P-201ENST00000382676 285 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 RNU6-253P-201ENST00000384730 105 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGA1P17096 AC092832.1-201ENST00000422934 400 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AL031736.2-201ENST00000426573 787 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 HMGB3P12-201ENST00000438745 556 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 TVP23BP2-201ENST00000455082 615 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGA1P17096 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGA1P17096 AC008716.1-201ENST00000511084 513 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 RNA5SP200-201ENST00000516360 103 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AL442163.2-201ENST00000553912 710 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.3□□□□□ -2.04
HMGA1P17096 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
HMGA1P17096 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.3□□□□□ -2.04
HMGA1P17096 BDH2P1-201ENST00000602288 736 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AL158827.2-201ENST00000602494 330 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 NF1P10-201ENST00000613227 742 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 AL691447.3-201ENST00000635020 330 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HMGA1P17096 AC008432.1-201ENST00000615912 1320 ntBASIC2.3□□□□□ -2.04
HMGA1P17096 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HMGA1P17096 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HMGA1P17096 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGA1P17096 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGA1P17096 AC104454.1-201ENST00000421341 1401 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HMGA1P17096 SNORD114-1-201ENST00000362705 72 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGA1P17096 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HMGA1P17096 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGA1P17096 UBE2V2P1-201ENST00000434717 398 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.29□□□□□ -2.04
HMGA1P17096 TRBV26-201ENST00000456572 344 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.29□□□□□ -2.04
HMGA1P17096 SCARNA16.3-201ENST00000516595 184 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 OR8X1P-201ENST00000534542 869 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.29□□□□□ -2.04
HMGA1P17096 AC012182.1-201ENST00000570133 895 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGA1P17096 ABI1P1-201ENST00000603375 1120 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 AL451074.6-201ENST00000608512 729 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 AL162233.1-201ENST00000620014 944 ntBASIC2.29□□□□□ -2.04
HMGA1P17096 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
HMGA1P17096 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
HMGA1P17096 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms