Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
NCK1P16333 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.07□□□□□ -1.92
NCK1P16333 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 ANKRD36P1-201ENST00000344424 659 ntBASIC3.07□□□□□ -1.92
NCK1P16333 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
NCK1P16333 RNU6-878P-201ENST00000384578 110 ntBASIC3.07□□□□□ -1.92
NCK1P16333 RNU6-1257P-201ENST00000384625 110 ntBASIC3.07□□□□□ -1.92
NCK1P16333 RNU6-1300P-201ENST00000391046 108 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.07□□□□□ -1.92
NCK1P16333 MTND4LP10-201ENST00000435146 291 ntBASIC3.07□□□□□ -1.92
NCK1P16333 SNRPEP4-201ENST00000435815 279 ntBASIC3.07□□□□□ -1.92
NCK1P16333 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.07□□□□□ -1.92
NCK1P16333 SNORD105B-201ENST00000458770 79 ntBASIC3.07□□□□□ -1.92
NCK1P16333 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 RN7SL132P-201ENST00000478131 296 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC013828.1-201ENST00000481845 158 ntBASIC3.07□□□□□ -1.92
NCK1P16333 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.07□□□□□ -1.92
NCK1P16333 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 AC010625.1-201ENST00000511296 403 ntBASIC3.07□□□□□ -1.92
NCK1P16333 RNU6-27P-201ENST00000516146 107 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.07□□□□□ -1.92
NCK1P16333 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.07□□□□□ -1.92
NCK1P16333 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 AP000619.3-201ENST00000535634 1127 ntBASIC3.07□□□□□ -1.92
NCK1P16333 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.07□□□□□ -1.92
NCK1P16333 AC126177.3-201ENST00000551839 688 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC074050.1-201ENST00000563247 211 ntBASIC3.07□□□□□ -1.92
NCK1P16333 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 AC007224.1-201ENST00000564410 144 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC126365.2-201ENST00000580630 379 ntBASIC3.07□□□□□ -1.92
NCK1P16333 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.07□□□□□ -1.92
NCK1P16333 AL035411.2-201ENST00000604022 421 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AL591516.1-201ENST00000611326 274 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC231759.1-201ENST00000616455 597 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC006249.1-201ENST00000621223 471 ntBASIC3.07□□□□□ -1.92
NCK1P16333 AC091925.2-201ENST00000625059 256 ntBASIC3.07□□□□□ -1.92
NCK1P16333 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.07□□□□□ -1.92
NCK1P16333 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
NCK1P16333 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
NCK1P16333 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.07□□□□□ -1.92
NCK1P16333 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 RNU4-35P-201ENST00000362588 141 ntBASIC3.06□□□□□ -1.92
NCK1P16333 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 RNU6-1074P-201ENST00000383995 104 ntBASIC3.06□□□□□ -1.92
NCK1P16333 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 ARF4P3-201ENST00000397387 509 ntBASIC3.06□□□□□ -1.92
NCK1P16333 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.06□□□□□ -1.92
NCK1P16333 RNA5SP229-201ENST00000410809 99 ntBASIC3.06□□□□□ -1.92
NCK1P16333 RPS15AP38-201ENST00000413110 372 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 LUZP4P1-201ENST00000415420 344 ntBASIC3.06□□□□□ -1.92
NCK1P16333 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 YPEL5P1-201ENST00000419731 367 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.06□□□□□ -1.92
NCK1P16333 PTGES3P1-201ENST00000439531 483 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 AC073387.1-201ENST00000453261 709 ntBASIC3.06□□□□□ -1.92
NCK1P16333 ST13P14-201ENST00000474095 734 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.06□□□□□ -1.92
NCK1P16333 AC016550.1-201ENST00000505348 785 ntBASIC3.06□□□□□ -1.92
NCK1P16333 KLHL2P1-201ENST00000508691 521 ntBASIC3.06□□□□□ -1.92
NCK1P16333 FCF1P8-201ENST00000510322 597 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC104619.4-201ENST00000510773 249 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 AC008837.1-201ENST00000511513 412 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 HMGN1P15-201ENST00000513870 295 ntBASIC3.06□□□□□ -1.92
NCK1P16333 RN7SKP18-201ENST00000516005 275 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.06□□□□□ -1.92
NCK1P16333 MTCO3P15-201ENST00000526563 574 ntBASIC3.06□□□□□ -1.92
NCK1P16333 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.06□□□□□ -1.92
NCK1P16333 AC090502.2-201ENST00000549267 280 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.06□□□□□ -1.92
NCK1P16333 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 MIR3160-1-201ENST00000577972 85 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.06□□□□□ -1.92
NCK1P16333 AL162713.1-201ENST00000604480 262 ntBASIC3.06□□□□□ -1.92
NCK1P16333 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AL158211.2-201ENST00000607282 395 ntBASIC3.06□□□□□ -1.92
NCK1P16333 AL353748.2-201ENST00000622148 471 ntBASIC3.06□□□□□ -1.92
NCK1P16333 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
NCK1P16333 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
NCK1P16333 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.05□□□□□ -1.92
NCK1P16333 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms