Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ARF4P4-201ENST00000439608 520 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.7□□□□□ -1.82
COL2A1P02458 AL929288.2-201ENST00000446368 407 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC016696.1-201ENST00000446949 318 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC140076.1-201ENST00000449897 361 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.7□□□□□ -1.82
COL2A1P02458 RPS6P2-201ENST00000454208 705 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 NECAP1P2-201ENST00000455668 727 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC011037.1-201ENST00000483964 558 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 RPF2P2-201ENST00000504693 896 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC091860.1-201ENST00000505723 432 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 RNU5A-4P-201ENST00000516588 111 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 MTCO2P15-201ENST00000532655 656 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC007115.1-201ENST00000546853 234 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.7□□□□□ -1.82
COL2A1P02458 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.7□□□□□ -1.82
COL2A1P02458 AL021997.1-201ENST00000605757 193 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC024257.5-201ENST00000612739 531 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC073968.1-201ENST00000618594 637 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AC090617.9-201ENST00000623751 147 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.7□□□□□ -1.82
COL2A1P02458 AC073476.4-201ENST00000628409 72 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
COL2A1P02458 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.7□□□□□ -1.82
COL2A1P02458 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
COL2A1P02458 AL359693.1-201ENST00000614959 2407 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 AC096644.4-201ENST00000563417 2912 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 OR1S2-201ENST00000302592 978 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL2A1P02458 RNU4-44P-201ENST00000363050 141 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL2A1P02458 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.69□□□□□ -1.82
COL2A1P02458 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 RPL7P25-201ENST00000404151 721 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.69□□□□□ -1.82
COL2A1P02458 MTCO3P41-201ENST00000414801 328 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 RPS3AP37-201ENST00000419176 745 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AL139413.1-201ENST00000421309 217 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.69□□□□□ -1.82
COL2A1P02458 GTF2IP3-201ENST00000433887 494 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC092393.1-201ENST00000439625 742 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.69□□□□□ -1.82
COL2A1P02458 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 Z99127.2-201ENST00000441426 334 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC008280.2-201ENST00000455473 307 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 HMGB1P3-201ENST00000502802 616 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 VN1R104P-201ENST00000505115 1009 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC091826.1-201ENST00000514065 313 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.69□□□□□ -1.82
COL2A1P02458 MIR2114-201ENST00000516645 80 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC3.69□□□□□ -1.82
COL2A1P02458 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 AC024909.2-201ENST00000553035 286 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 H3F3AP1-201ENST00000559984 334 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.69□□□□□ -1.82
COL2A1P02458 MTATP6P3-201ENST00000581686 676 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.69□□□□□ -1.82
COL2A1P02458 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.69□□□□□ -1.82
COL2A1P02458 TUSC7.1-201ENST00000610969 165 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC005609.4-201ENST00000625071 447 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.69□□□□□ -1.82
COL2A1P02458 AC090897.3-201ENST00000636973 1157 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 AC092104.1-201ENST00000497346 1441 ntBASIC3.69□□□□□ -1.82
COL2A1P02458 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL2A1P02458 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
COL2A1P02458 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.69□□□□□ -1.82
COL2A1P02458 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.68□□□□□ -1.82
COL2A1P02458 AP002088.1-201ENST00000382740 395 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.68□□□□□ -1.82
COL2A1P02458 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 AL513175.2-201ENST00000422071 443 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.68□□□□□ -1.82
COL2A1P02458 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.68□□□□□ -1.82
COL2A1P02458 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC3.68□□□□□ -1.82
COL2A1P02458 RPL31P20-201ENST00000449593 360 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 MRPS31P2-201ENST00000451581 518 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC108734.3-201ENST00000481241 1165 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms