Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 MTND5P10-201ENST00000603719 1809 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP258-201ENST00000362750 119 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RN7SKP162-201ENST00000363605 345 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP223-201ENST00000365174 120 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 Y_RNA.378-201ENST00000365652 113 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RNU6-1029P-201ENST00000384109 107 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RNU2-29P-201ENST00000410423 189 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RPS12P24-201ENST00000412619 387 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 OR6C66P-201ENST00000414917 930 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC114482.1-201ENST00000418010 247 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RPL31P12-201ENST00000422587 358 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC108075.1-201ENST00000424692 529 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 FTLP19-201ENST00000433300 394 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RPL12P18-201ENST00000437175 325 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 GAPDHP58-201ENST00000438477 1006 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 RPL21P89-201ENST00000444021 467 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC021382.1-201ENST00000483523 359 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC005726.1-201ENST00000494679 427 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 CCDC34P1-201ENST00000507441 517 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AP000857.1-201ENST00000532151 543 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 MIR4703-201ENST00000577728 79 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PRPF19P1-201ENST00000584766 898 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL670379.11-201ENST00000604059 253 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 IMMP1LP3-201ENST00000604197 224 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL670379.10-201ENST00000604330 253 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL670379.12-201ENST00000605291 253 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL670379.9-201ENST00000605428 253 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC113194.1-201ENST00000606037 500 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC022893.3-201ENST00000607665 437 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL355816.1-201ENST00000607951 118 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC090510.2-201ENST00000617465 629 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AL596245.1-201ENST00000618994 362 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC022418.1-201ENST00000624118 445 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 MTND5P19-201ENST00000424872 1794 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 AC002525.1-201ENST00000624392 1622 ntBASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AL606537.1-201ENST00000607258 2011 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC121333.1-201ENST00000567488 2709 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC091046.3-201ENST00000631455 1574 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 RPL32P3-201ENST00000359025 275 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 RNU6-97P-201ENST00000363387 104 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 U3.11-201ENST00000364476 212 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC093655.2-201ENST00000425735 631 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 CBX3P6-201ENST00000430257 527 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AL161722.2-201ENST00000434731 981 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 CEACAMP9-201ENST00000442990 513 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC104073.1-201ENST00000451988 151 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 MTCO3P10-201ENST00000455912 772 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 snoU13.8-201ENST00000458890 104 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 Y_RNA.653-201ENST00000459091 95 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms