Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-1303P-201ENST00000364841 107 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RN7SKP292-201ENST00000365522 317 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNU6-45P-201ENST00000384471 107 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNU6-790P-201ENST00000384479 105 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 MIR628-201ENST00000385229 95 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 MIR1298-201ENST00000408783 112 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNU6-1140P-201ENST00000410517 106 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AL451074.5-201ENST00000415894 435 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 Z82198.3-201ENST00000421145 199 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RPL23AP25-201ENST00000430973 463 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC094019.1-201ENST00000434678 472 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC007967.1-201ENST00000455422 1159 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.644-201ENST00000459006 113 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNU6-27P-201ENST00000516146 107 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.674-201ENST00000516362 113 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RN7SKP70-201ENST00000516655 271 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC036111.2-201ENST00000533247 901 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RNF138P2-201ENST00000603490 592 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 BX284668.6-201ENST00000606899 438 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 MIR6889-201ENST00000613185 59 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC015819.1-201ENST00000613588 663 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC073488.3-201ENST00000631611 778 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 AC011978.2-201ENST00000569835 2054 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 LINC01613-201ENST00000561476 2780 ntBASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCDC116Q8IYX3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC009951.1-201ENST00000623674 2614 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC097461.1-201ENST00000568928 2821 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.277-201ENST00000364754 102 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 SNORA43.1-201ENST00000364863 140 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 MIR215-201ENST00000384858 110 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 RNU6-493P-201ENST00000391321 108 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC092809.3-201ENST00000415453 231 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 RPL24P2-201ENST00000421023 475 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 RPL7AP51-201ENST00000422016 760 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 DNAJC19P7-201ENST00000428811 344 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC010655.1-201ENST00000449336 292 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 Y_RNA.710-201ENST00000516975 110 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 IGKV2-23-201ENST00000518729 323 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC116917.1-201ENST00000520558 305 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC018442.3-201ENST00000523025 183 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 DEFB108E-201ENST00000524692 240 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AC004584.2-201ENST00000570407 410 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AL160281.1-201ENST00000605307 311 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AL591516.1-201ENST00000611326 274 ntBASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCDC116Q8IYX3 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CCDC116Q8IYX3 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CCDC116Q8IYX3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms