Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AC092447.9-201ENST00000603395 144 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AP000346.3-201ENST00000622821 210 ntBASIC6.72□□□□□ -1.33
RC3H1Q5TC82 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RC3H1Q5TC82 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 AL355834.1-201ENST00000556602 3965 ntBASIC6.71□□□□□ -1.33
RC3H1Q5TC82 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 AL353796.1-201ENST00000561542 3241 ntBASIC6.71□□□□□ -1.33
RC3H1Q5TC82 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RC3H1Q5TC82 IRF5P1-201ENST00000504852 2164 ntBASIC6.71□□□□□ -1.33
RC3H1Q5TC82 AC003973.3-201ENST00000624863 2822 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC020633.1-201ENST00000468439 2247 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 Y_RNA.14-201ENST00000362415 103 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 RNA5SP455-201ENST00000365190 119 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC093156.1-201ENST00000440382 670 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 SNRPFP3-201ENST00000457792 225 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 RNU7-27P-201ENST00000459281 62 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 RPL23AP71-201ENST00000470966 469 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 RN7SL481P-201ENST00000477764 299 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 GAPDHP62-201ENST00000515313 990 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 COX6B1P6-201ENST00000522347 255 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC018552.3-201ENST00000567416 561 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 AL161616.1-201ENST00000611867 286 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 FTX_2.1-201ENST00000618816 94 ntBASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RC3H1Q5TC82 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 MT-TW-201ENST00000387382 68 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 MIR1302-6-201ENST00000408466 90 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AC012065.2-201ENST00000421295 375 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 NANOGP10-201ENST00000453325 895 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AC008897.1-201ENST00000494006 347 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 RN7SKP260-201ENST00000516907 149 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 MIR4703-201ENST00000577728 79 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 MIR6780A-201ENST00000615089 68 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 U1.34-201ENST00000618578 162 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 MIR7703-201ENST00000620784 77 ntBASIC6.7□□□□□ -1.34
RC3H1Q5TC82 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.7□□□□□ -1.34
RC3H1Q5TC82 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 AL022323.4-201ENST00000623980 13120 ntBASIC6.69□□□□□ -1.34
RC3H1Q5TC82 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.69□□□□□ -1.34
RC3H1Q5TC82 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms