Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 COL6A4P2-205ENST00000509855 506 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC121161.1-201ENST00000510606 652 ntBASIC2.84□□□□□ -1.95
USF1P22415 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.84□□□□□ -1.95
USF1P22415 AC027338.1-201ENST00000514840 825 ntBASIC2.84□□□□□ -1.95
USF1P22415 RNU1-103P-201ENST00000516502 125 ntBASIC2.84□□□□□ -1.95
USF1P22415 RNU4ATAC10P-201ENST00000516967 122 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.84□□□□□ -1.95
USF1P22415 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.84□□□□□ -1.95
USF1P22415 AC026333.2-201ENST00000542164 106 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC011602.1-201ENST00000546484 331 ntBASIC2.84□□□□□ -1.95
USF1P22415 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.84□□□□□ -1.95
USF1P22415 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.84□□□□□ -1.95
USF1P22415 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.84□□□□□ -1.95
USF1P22415 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USF1P22415 CKS1BP3-201ENST00000600888 237 ntBASIC2.84□□□□□ -1.95
USF1P22415 AP002906.1-201ENST00000603405 233 ntBASIC2.84□□□□□ -1.95
USF1P22415 BNIP3P11-201ENST00000603878 563 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC073968.1-201ENST00000618594 637 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC097372.4-201ENST00000625025 466 ntBASIC2.84□□□□□ -1.95
USF1P22415 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.84□□□□□ -1.95
USF1P22415 AL590396.4-201ENST00000636779 956 ntBASIC2.84□□□□□ -1.95
USF1P22415 AL353743.1-202ENST00000431724 1695 ntBASIC2.84□□□□□ -1.95
USF1P22415 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
USF1P22415 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
USF1P22415 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
USF1P22415 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
USF1P22415 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.84□□□□□ -1.96
USF1P22415 MTCO1P4-201ENST00000520516 1409 ntBASIC2.84□□□□□ -1.96
USF1P22415 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.84□□□□□ -1.96
USF1P22415 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 AC058791.1-201ENST00000608412 3198 ntBASIC2.83□□□□□ -1.96
USF1P22415 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 RNU6-50P-201ENST00000362356 103 ntBASIC2.83□□□□□ -1.96
USF1P22415 RNU6-989P-201ENST00000362756 107 ntBASIC2.83□□□□□ -1.96
USF1P22415 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.83□□□□□ -1.96
USF1P22415 RNU6-932P-201ENST00000391108 106 ntBASIC2.83□□□□□ -1.96
USF1P22415 U3.26-201ENST00000391236 204 ntBASIC2.83□□□□□ -1.96
USF1P22415 BX664727.1-201ENST00000416024 466 ntBASIC2.83□□□□□ -1.96
USF1P22415 MTCO3P12-201ENST00000416718 547 ntBASIC2.83□□□□□ -1.96
USF1P22415 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.83□□□□□ -1.96
USF1P22415 FNDC3CP-201ENST00000420795 1155 ntBASIC2.83□□□□□ -1.96
USF1P22415 RPL17P35-201ENST00000432217 549 ntBASIC2.83□□□□□ -1.96
USF1P22415 TRIM60P18-201ENST00000441518 828 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 NECAP1P2-201ENST00000455668 727 ntBASIC2.83□□□□□ -1.96
USF1P22415 AP001992.1-205ENST00000462248 379 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC008379.1-201ENST00000463655 464 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC010401.1-201ENST00000463867 348 ntBASIC2.83□□□□□ -1.96
USF1P22415 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.83□□□□□ -1.96
USF1P22415 AC011352.3-201ENST00000505162 593 ntBASIC2.83□□□□□ -1.96
USF1P22415 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.83□□□□□ -1.96
USF1P22415 RNA5SP468-201ENST00000516782 93 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.83□□□□□ -1.96
USF1P22415 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 AC004024.1-201ENST00000549244 247 ntBASIC2.83□□□□□ -1.96
USF1P22415 AL121603.1-201ENST00000553815 142 ntBASIC2.83□□□□□ -1.96
USF1P22415 AL163153.1-201ENST00000554223 283 ntBASIC2.83□□□□□ -1.96
USF1P22415 MTCO3P24-201ENST00000572729 782 ntBASIC2.83□□□□□ -1.96
USF1P22415 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 MIR5004-201ENST00000579078 107 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC009948.4-201ENST00000604692 675 ntBASIC2.83□□□□□ -1.96
USF1P22415 AL162274.2-201ENST00000614406 332 ntBASIC2.83□□□□□ -1.96
USF1P22415 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.83□□□□□ -1.96
USF1P22415 MTND2P41-201ENST00000637599 773 ntBASIC2.83□□□□□ -1.96
USF1P22415 AL365361.1-201ENST00000566942 3481 ntBASIC2.83□□□□□ -1.96
USF1P22415 AC130650.2-201ENST00000618736 2403 ntBASIC2.83□□□□□ -1.96
USF1P22415 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
USF1P22415 AC002546.1-201ENST00000588041 2504 ntBASIC2.83□□□□□ -1.96
USF1P22415 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.83□□□□□ -1.96
USF1P22415 AL513302.2-201ENST00000562313 1842 ntBASIC2.82□□□□□ -1.96
USF1P22415 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
USF1P22415 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.82□□□□□ -1.96
USF1P22415 RNA5SP374-201ENST00000362939 125 ntBASIC2.82□□□□□ -1.96
USF1P22415 RNU6-1249P-201ENST00000363237 111 ntBASIC2.82□□□□□ -1.96
USF1P22415 RNU6-730P-201ENST00000383954 104 ntBASIC2.82□□□□□ -1.96
USF1P22415 TMSB4XP8-201ENST00000402089 135 ntBASIC2.82□□□□□ -1.96
USF1P22415 RNU4-47P-201ENST00000410876 114 ntBASIC2.82□□□□□ -1.96
USF1P22415 TMSB4XP6-201ENST00000415187 135 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.82□□□□□ -1.96
USF1P22415 TMSB4XP1-201ENST00000424567 135 ntBASIC2.82□□□□□ -1.96
USF1P22415 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.82□□□□□ -1.96
USF1P22415 GXYLT1P1-201ENST00000446657 490 ntBASIC2.82□□□□□ -1.96
USF1P22415 AL671855.1-201ENST00000446875 1203 ntBASIC2.82□□□□□ -1.96
USF1P22415 AL050341.1-201ENST00000447743 313 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.82□□□□□ -1.96
USF1P22415 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.82□□□□□ -1.96
USF1P22415 RPS27AP1-201ENST00000475545 471 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC021146.5-201ENST00000503544 545 ntBASIC2.82□□□□□ -1.96
USF1P22415 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.82□□□□□ -1.96
USF1P22415 TXNP6-201ENST00000510190 310 ntBASIC2.82□□□□□ -1.96
USF1P22415 RNU1-61P-201ENST00000516107 151 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms