Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.28□□□□□ -1.72
PF4V1P10720 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC027807.1-201ENST00000559921 996 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC009117.1-201ENST00000563948 554 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC000068.2-201ENST00000608816 460 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC092954.2-201ENST00000609103 430 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PF4V1P10720 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PF4V1P10720 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PF4V1P10720 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PF4V1P10720 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PF4V1P10720 Y_RNA.22-201ENST00000362492 102 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 RNU6-74P-201ENST00000384235 107 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 SNORA5.1-201ENST00000384275 131 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 Y_RNA.481-201ENST00000384373 102 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 SNORA67-201ENST00000384423 137 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 RNU2-39P-201ENST00000410604 198 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 CRYBB2P1-203ENST00000415709 538 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.27□□□□□ -1.73
PF4V1P10720 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 UBE2V1P8-201ENST00000437166 265 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 HMGB3P12-201ENST00000438745 556 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AL772161.1-201ENST00000439130 476 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC073465.2-201ENST00000440938 498 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 TXNP1-201ENST00000441872 371 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 CEACAMP7-201ENST00000444105 496 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC020550.1-201ENST00000447385 163 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 RAD23BP3-201ENST00000454157 1152 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC013267.1-201ENST00000458227 267 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 RPS20P20-201ENST00000460498 340 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 RPSAP50-201ENST00000481955 852 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 HSPD1P15-201ENST00000505573 1122 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC009646.1-201ENST00000510455 318 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC011352.1-201ENST00000512300 793 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC022832.1-201ENST00000530718 645 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AL512310.1-201ENST00000548639 172 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.27□□□□□ -1.73
PF4V1P10720 NCAPGP2-201ENST00000557911 754 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.27□□□□□ -1.73
PF4V1P10720 HMGB1P6-201ENST00000569046 646 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC005951.2-201ENST00000576282 495 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC007363.1-201ENST00000604736 620 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AL049634.3-201ENST00000604968 457 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 Z84480.1-201ENST00000605131 311 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC126915.2-201ENST00000610957 190 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC090517.2-201ENST00000614966 680 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 MIR7155-201ENST00000615925 56 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AC139792.3-201ENST00000623525 224 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 AL160394.1-201ENST00000624765 724 ntBASIC4.27□□□□□ -1.73
PF4V1P10720 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PF4V1P10720 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
PF4V1P10720 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PF4V1P10720 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
PF4V1P10720 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PF4V1P10720 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PF4V1P10720 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.26□□□□□ -1.73
PF4V1P10720 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
PF4V1P10720 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
PF4V1P10720 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PF4V1P10720 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
PF4V1P10720 Y_RNA.9-201ENST00000362354 101 ntBASIC4.26□□□□□ -1.73
PF4V1P10720 RNU6-1085P-201ENST00000363576 107 ntBASIC4.26□□□□□ -1.73
PF4V1P10720 RNU6-641P-201ENST00000384006 107 ntBASIC4.26□□□□□ -1.73
PF4V1P10720 MIR514A1-201ENST00000385133 98 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms