Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.54□□□□□ -2.16
NDUFA1O15239 AP000553.5-201ENST00000641933 54 ntBASIC1.54□□□□□ -2.16
NDUFA1O15239 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.54□□□□□ -2.16
NDUFA1O15239 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.54□□□□□ -2.16
NDUFA1O15239 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NDUFA1O15239 OR56A5-201ENST00000340110 738 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NDUFA1O15239 AC062016.1-201ENST00000355719 319 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 Y_RNA.333-201ENST00000365274 102 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
NDUFA1O15239 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.53□□□□□ -2.16
NDUFA1O15239 OR5H15-201ENST00000383696 930 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 RNU4-52P-201ENST00000384209 138 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC1.53□□□□□ -2.16
NDUFA1O15239 MRPL50P2-201ENST00000416821 482 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 NUP35P1-201ENST00000422734 947 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.53□□□□□ -2.16
NDUFA1O15239 RPS6P14-201ENST00000425165 719 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 RPS15AP28-201ENST00000435088 386 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AL157827.1-201ENST00000447622 132 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 NPM1P49-201ENST00000448027 714 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
NDUFA1O15239 SNORD108-201ENST00000459332 71 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC025033.1-201ENST00000463883 194 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC005912.1-201ENST00000495392 255 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC1.53□□□□□ -2.16
NDUFA1O15239 AC234781.5-201ENST00000508429 271 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 HIGD1AP3-201ENST00000515857 278 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 RNU1-40P-201ENST00000516816 164 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 RNU1-97P-201ENST00000516872 164 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 UBTFL10-201ENST00000528532 562 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.53□□□□□ -2.16
NDUFA1O15239 AC093536.2-201ENST00000565257 1406 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 HMGB1P6-201ENST00000569046 646 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
NDUFA1O15239 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.53□□□□□ -2.16
NDUFA1O15239 VN1R92P-201ENST00000598511 928 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC007423.1-201ENST00000605009 627 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC103810.6-201ENST00000606708 136 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 MIR6817-201ENST00000615588 66 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 MIR6132-201ENST00000622083 109 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 AC092159.4-201ENST00000624944 550 ntBASIC1.53□□□□□ -2.16
NDUFA1O15239 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.53□□□□□ -2.16
NDUFA1O15239 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
NDUFA1O15239 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
NDUFA1O15239 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NDUFA1O15239 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.52□□□□□ -2.17
NDUFA1O15239 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NDUFA1O15239 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
NDUFA1O15239 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
NDUFA1O15239 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.52□□□□□ -2.17
NDUFA1O15239 MIR208A-201ENST00000362287 71 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 RNA5SP138-201ENST00000365098 114 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 MIR518C-201ENST00000384822 101 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 HMGB1P10-201ENST00000395823 563 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 RN7SKP222-201ENST00000410651 315 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 RN7SKP140-201ENST00000411196 284 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.52□□□□□ -2.17
NDUFA1O15239 RFESDP1-201ENST00000422350 461 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 USP9YP36-201ENST00000424581 829 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 SRIP2-201ENST00000428470 166 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC006946.1-201ENST00000429106 328 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 RPS7P5-201ENST00000441482 581 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC005002.1-201ENST00000447458 540 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC104849.1-201ENST00000462623 405 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AL136126.1-201ENST00000473603 402 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 AC079804.2-201ENST00000490376 200 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC010625.1-201ENST00000511296 403 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 RNA5SP356-201ENST00000515972 94 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.52□□□□□ -2.17
NDUFA1O15239 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
NDUFA1O15239 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC1.52□□□□□ -2.17
NDUFA1O15239 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC1.52□□□□□ -2.17
NDUFA1O15239 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC1.52□□□□□ -2.17
NDUFA1O15239 MIR5007-201ENST00000583098 95 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.52□□□□□ -2.17
NDUFA1O15239 AC010928.3-201ENST00000587712 541 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 VIS1.1-201ENST00000610517 203 ntBASIC1.52□□□□□ -2.17
NDUFA1O15239 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.52□□□□□ -2.17
NDUFA1O15239 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.52□□□□□ -2.17
NDUFA1O15239 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NDUFA1O15239 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
NDUFA1O15239 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NDUFA1O15239 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
NDUFA1O15239 HSPE1P11-201ENST00000339579 310 ntBASIC1.51□□□□□ -2.17
NDUFA1O15239 SNORA5B-201ENST00000363786 132 ntBASIC1.51□□□□□ -2.17
NDUFA1O15239 RNA5SP68-201ENST00000363885 119 ntBASIC1.51□□□□□ -2.17
NDUFA1O15239 RNA5SP387-201ENST00000364226 106 ntBASIC1.51□□□□□ -2.17
NDUFA1O15239 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
NDUFA1O15239 FO393413.1-201ENST00000402892 195 ntBASIC1.51□□□□□ -2.17
NDUFA1O15239 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.51□□□□□ -2.17
NDUFA1O15239 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.51□□□□□ -2.17
NDUFA1O15239 NANOGP5-201ENST00000424456 877 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms