Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.65□□□□□ -1.99
UBFD1O14562 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 MTCO3P13-201ENST00000577757 781 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.65□□□□□ -1.99
UBFD1O14562 RNA5SP108-201ENST00000605921 117 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 AC116312.1-201ENST00000606841 314 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UBFD1O14562 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.65□□□□□ -1.99
UBFD1O14562 AC119674.1-220ENST00000641502 1048 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 FAM35BP-202ENST00000497389 3337 ntBASIC2.65□□□□□ -1.99
UBFD1O14562 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.65□□□□□ -1.99
UBFD1O14562 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UBFD1O14562 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UBFD1O14562 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
UBFD1O14562 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.64□□□□□ -1.99
UBFD1O14562 AL513175.2-201ENST00000422071 443 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 SAR1AP4-201ENST00000429225 591 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.64□□□□□ -1.99
UBFD1O14562 RPL39P40-201ENST00000445481 146 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 ST13P20-201ENST00000447996 1065 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.64□□□□□ -1.99
UBFD1O14562 AC117522.3-201ENST00000507974 584 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 HMGB1P47-201ENST00000511281 589 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.64□□□□□ -1.99
UBFD1O14562 AL049870.4-201ENST00000555741 486 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC2.64□□□□□ -1.99
UBFD1O14562 RPL12P50-201ENST00000603116 116 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 YWHAQP7-201ENST00000603536 658 ntBASIC2.64□□□□□ -1.99
UBFD1O14562 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.64□□□□□ -1.99
UBFD1O14562 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.64□□□□□ -1.99
UBFD1O14562 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC2.64□□□□□ -1.99
UBFD1O14562 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
UBFD1O14562 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
UBFD1O14562 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.63□□□□□ -1.99
UBFD1O14562 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
UBFD1O14562 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 EEF1A1P41-201ENST00000414667 207 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 RPL7P10-201ENST00000417407 739 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.63□□□□□ -1.99
UBFD1O14562 MRPS33P4-201ENST00000434892 317 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AC005002.1-201ENST00000447458 540 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.63□□□□□ -1.99
UBFD1O14562 HIGD1AP13-201ENST00000509878 289 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AC093770.1-201ENST00000511559 571 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 RN7SKP234-201ENST00000517173 224 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 OR4A45P-201ENST00000529954 901 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.63□□□□□ -1.99
UBFD1O14562 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.63□□□□□ -1.99
UBFD1O14562 AC092447.7-201ENST00000422212 1621 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 AL136164.4-201ENST00000625013 2135 ntBASIC2.63□□□□□ -1.99
UBFD1O14562 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UBFD1O14562 SNORD21-201ENST00000383953 95 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 RNU6-301P-201ENST00000384277 107 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.62□□□□□ -1.99
UBFD1O14562 HNRNPDP2-201ENST00000406475 478 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 RNU2-21P-201ENST00000410368 188 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 RPL31P2-201ENST00000413849 377 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC234782.4-201ENST00000417646 1048 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.62□□□□□ -1.99
UBFD1O14562 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.62□□□□□ -1.99
UBFD1O14562 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 CACYBPP2-201ENST00000453625 678 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.62□□□□□ -1.99
UBFD1O14562 RPL23AP31-201ENST00000456160 467 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC096992.1-201ENST00000459808 709 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
UBFD1O14562 RPS27AP9-201ENST00000477681 438 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.62□□□□□ -1.99
UBFD1O14562 AC091917.2-201ENST00000505002 744 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC118465.1-201ENST00000513820 1271 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.62□□□□□ -1.99
UBFD1O14562 AC103783.1-201ENST00000520506 373 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 OR8L1P-201ENST00000534005 955 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC079600.2-201ENST00000550076 130 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 SYF2P1-201ENST00000550658 413 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.62□□□□□ -1.99
UBFD1O14562 AC007954.1-201ENST00000554198 494 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC010928.3-201ENST00000587712 541 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC112503.1-201ENST00000608436 391 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 U6.48-201ENST00000618523 106 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 LINC00216-201ENST00000623548 1126 ntBASIC2.62□□□□□ -1.99
UBFD1O14562 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UBFD1O14562 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.62□□□□□ -1.99
UBFD1O14562 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AL157700.1-201ENST00000561973 1432 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC011978.2-201ENST00000569835 2054 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UBFD1O14562 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms