Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RPL7P36-201ENST00000444633 681 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 RN7SL293P-201ENST00000481765 281 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 GAPDHP39-201ENST00000481866 979 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC111193.1-201ENST00000504097 155 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 HSPE1P23-201ENST00000509838 286 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 RNA5SP249-201ENST00000516127 99 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC078814.3-201ENST00000553036 491 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 NIFKP8-201ENST00000560500 874 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AP005137.2-201ENST00000609238 400 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AL359535.1-201ENST00000612100 1087 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 MIR6852-201ENST00000621699 66 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 AL022578.1-201ENST00000439330 1433 ntBASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL17A1Q9UMD9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 RNU6-1090P-201ENST00000364065 94 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 RPL21P17-201ENST00000397467 475 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.605-201ENST00000410577 105 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC092745.2-202ENST00000411880 369 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC016691.1-201ENST00000441321 413 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 RPL35AP15-201ENST00000468042 339 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 CDH12P2-201ENST00000504393 298 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC087808.1-201ENST00000520501 361 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 OR5AQ1P-201ENST00000527596 927 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AC105429.2-201ENST00000610567 517 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 AL158209.2-201ENST00000619266 216 ntBASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
COL17A1Q9UMD9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.402-201ENST00000383972 102 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 Y_RNA.422-201ENST00000384054 114 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RNU6-505P-201ENST00000384427 107 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 MTND6P5-201ENST00000448266 512 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL591363.1-201ENST00000450091 483 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RAD23BP3-201ENST00000454157 1152 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC009646.1-201ENST00000510455 318 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 RFPL4AP3-201ENST00000515267 345 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC093853.1-201ENST00000515689 483 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC100830.2-201ENST00000581636 240 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 MIR3171-201ENST00000584270 74 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 BNIP3P4-201ENST00000604946 565 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL592436.1-201ENST00000605135 558 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL031666.3-201ENST00000609320 1006 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AL132765.2-201ENST00000610812 351 ntBASIC6.41□□□□□ -1.38
COL17A1Q9UMD9 AC124864.2-201ENST00000624736 186 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms