Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 Z95331.1-201ENST00000623075 23112 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 OR55B1P-203ENST00000641518 2602 ntBASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDC42EP3Q9UKI2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CDC42EP3Q9UKI2 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 SNORA17.1-201ENST00000362945 126 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 Y_RNA.100-201ENST00000363141 102 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RNU1-146P-201ENST00000364015 165 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RNU1-43P-201ENST00000365052 165 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RNU4-20P-201ENST00000365601 151 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 SNORA32.2-201ENST00000384049 122 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RNA5SP487-201ENST00000410186 122 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 Y_RNA.615-201ENST00000410769 117 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SKP247-201ENST00000411094 308 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RPS26P47-201ENST00000427219 348 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AL356276.2-201ENST00000435919 558 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AL121877.1-201ENST00000453704 622 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC007547.1-201ENST00000462177 490 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SL809P-201ENST00000482040 297 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SL591P-201ENST00000496150 292 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RNU4-29P-201ENST00000515943 174 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 EDDM3DP-201ENST00000554692 434 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 MIR4775-201ENST00000581168 75 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC233702.9-201ENST00000581528 203 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC008638.3-201ENST00000603341 463 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AP001836.1-201ENST00000604675 523 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AL365204.3-201ENST00000612448 685 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC093913.1-201ENST00000614178 329 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC068831.8-201ENST00000620171 435 ntBASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDC42EP3Q9UKI2 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 IQCB2P-201ENST00000401788 1633 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 U3.12-201ENST00000364498 214 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-38P-201ENST00000384085 107 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 RPS4XP9-201ENST00000405151 780 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 DUTP5-201ENST00000406790 469 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 HMGN1P24-201ENST00000412282 298 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 RPL26P29-201ENST00000415623 438 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 OR2AS1P-201ENST00000427827 319 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 AL049745.1-201ENST00000433953 286 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 RNU6-333P-201ENST00000459117 107 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 AC096576.1-201ENST00000489014 359 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 ENPP7P11-201ENST00000505915 627 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 SCARNA16.4-201ENST00000516956 187 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 RN7SKP256-201ENST00000517201 314 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 AC103843.2-201ENST00000530523 682 ntBASIC4.51□□□□□ -1.69
CDC42EP3Q9UKI2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms