Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 PDCL2P1-201ENST00000419302 352 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AL354766.1-201ENST00000423396 542 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 RPL23AP38-201ENST00000423801 469 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 RPL31P35-201ENST00000431058 377 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC023347.2-201ENST00000433994 462 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 CBWD4P-201ENST00000445695 655 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 RNU6-261P-201ENST00000459506 102 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC022034.3-201ENST00000471393 478 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC243972.3-201ENST00000539655 198 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 DISC2.1-201ENST00000612827 205 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 AC007792.1-201ENST00000623023 402 ntBASIC5.72□□□□□ -1.49
CNTNAP4Q9C0A0 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
CNTNAP4Q9C0A0 AP001029.2-203ENST00000589795 4910 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AL445487.1-201ENST00000415694 1580 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC022031.1-201ENST00000585985 2593 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 OR52B1P-201ENST00000316506 909 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 MIR331-201ENST00000362302 94 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 Y_RNA.394-201ENST00000383942 103 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 MRPL42P2-201ENST00000403169 426 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 EIF4A1P3-201ENST00000411521 244 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 MTCO3P12-201ENST00000416718 547 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC104651.2-201ENST00000447549 528 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 HMGN3P1-201ENST00000453847 193 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 BTF3P5-201ENST00000457252 467 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AP002812.1-201ENST00000495378 474 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 Vault.3-201ENST00000516676 95 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 RNU6-201P-201ENST00000517100 61 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC090502.2-201ENST00000549267 280 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 MIR98-201ENST00000606724 119 ntBASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTNAP4Q9C0A0 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 CCT4P2-201ENST00000233836 1548 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC004656.1-201ENST00000568479 4951 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 NMD3P1-201ENST00000439704 1488 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 Y_RNA.159-201ENST00000363674 87 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL121972.1-201ENST00000402023 252 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 OR9R1P-201ENST00000412200 877 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 MRPL50P2-201ENST00000416821 482 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL356095.1-201ENST00000417217 199 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL353193.1-201ENST00000421444 268 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 MTND6P18-201ENST00000439477 513 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 USP9YP15-201ENST00000442391 422 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 RPL23AP12-201ENST00000467573 473 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL132838.2-201ENST00000492041 314 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC008958.1-201ENST00000511047 682 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 SNORA67.7-201ENST00000516664 135 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC105029.1-201ENST00000520250 669 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 PSMA3P-201ENST00000555485 635 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 CYCSP40-201ENST00000575927 294 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms