Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AP000542.2-201ENST00000623199 6179 ntBASIC4.47□□□□□ -1.69
VRK3Q8IV63 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK3Q8IV63 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK3Q8IV63 AC108751.5-201ENST00000492880 1336 ntBASIC4.46□□□□□ -1.69
VRK3Q8IV63 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VRK3Q8IV63 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VRK3Q8IV63 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.46□□□□□ -1.69
VRK3Q8IV63 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 RNU6-282P-201ENST00000365357 103 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 RNU1-39P-201ENST00000383897 165 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 MTND2P23-201ENST00000422990 651 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 RPEP2-201ENST00000432149 701 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 HMGB3P12-201ENST00000438745 556 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 HMGB3P9-201ENST00000441799 583 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 NIPA2P5-201ENST00000452282 464 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 NDUFA5P7-201ENST00000452914 242 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 RNU6-1045P-201ENST00000516321 107 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 RN7SKP283-201ENST00000517197 270 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 COX6B1P6-201ENST00000522347 255 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AL389895.1-201ENST00000554127 252 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC055876.1-202ENST00000567053 138 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 TPMTP1-201ENST00000592307 737 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC005086.4-201ENST00000623065 213 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC138649.5-201ENST00000637456 137 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 OR2L1P-202ENST00000641567 1023 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AC025125.1-201ENST00000624743 1922 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 CCT4P2-201ENST00000233836 1548 ntBASIC4.46□□□□□ -1.7
VRK3Q8IV63 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VRK3Q8IV63 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK3Q8IV63 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC097504.1-201ENST00000515103 2415 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC012618.3-205ENST00000637896 1496 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 RNU6-398P-201ENST00000384143 109 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 HMGB1P17-201ENST00000403495 628 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RPS16P5-201ENST00000406501 404 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 MIR320C1-201ENST00000408566 88 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 RPEP3-201ENST00000425462 676 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RPL21P91-201ENST00000429231 479 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RPL31P35-201ENST00000431058 377 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 CBX1P1-201ENST00000440184 427 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC099563.1-201ENST00000456086 418 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 RPS29P33-201ENST00000456717 146 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC083798.1-201ENST00000472671 131 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC017015.1-201ENST00000477387 286 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC007686.1-201ENST00000488511 463 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 AC093278.1-201ENST00000494700 600 ntBASIC4.45□□□□□ -1.7
VRK3Q8IV63 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.45□□□□□ -1.7
VRK3Q8IV63 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms