Protein–RNA interactions for Protein: Q7Z494

NPHP3, Nephrocystin-3, humanhuman

Predictions only

Length 1,330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3Q7Z494 RNU6-1231P-201ENST00000517185 103 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 ATP5F1P7-201ENST00000567330 760 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 MIR4789-201ENST00000577469 82 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC138761.3-201ENST00000579993 334 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC096586.1-201ENST00000610267 561 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AL592295.2-201ENST00000612578 206 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 MIR6864-201ENST00000617935 70 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AL512427.1-201ENST00000618593 349 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 RNU6-156P-201ENST00000621869 107 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 AC017104.5-201ENST00000637647 639 ntBASIC4.19□□□□□ -1.74
NPHP3Q7Z494 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 RNU6-925P-201ENST00000384629 104 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AL031679.1-201ENST00000400616 525 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 MTND2P9-201ENST00000422293 931 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC019097.1-201ENST00000424783 735 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 Z99127.3-201ENST00000448158 395 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC004801.2-202ENST00000463559 283 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC119751.4-201ENST00000507498 357 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 RN7SKP60-201ENST00000516985 239 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC126544.2-201ENST00000625174 749 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 AC004808.1-201ENST00000627671 721 ntBASIC4.18□□□□□ -1.74
NPHP3Q7Z494 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AL136964.1-201ENST00000622038 2990 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 RNU6-1339P-201ENST00000363574 91 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 RNU6-1257P-201ENST00000384625 110 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 PRRC2CP1-201ENST00000404428 159 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 RPL7P36-201ENST00000444633 681 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 RN7SKP96-201ENST00000516948 297 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC087894.1-201ENST00000538359 518 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AL365503.1-201ENST00000605247 905 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC097504.2-201ENST00000608088 454 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC124016.2-201ENST00000610058 665 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC104763.3-201ENST00000613765 618 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC231759.1-201ENST00000616455 597 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC018926.3-201ENST00000618841 406 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 AC006927.2-201ENST00000639256 389 ntBASIC4.17□□□□□ -1.74
NPHP3Q7Z494 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 AC046144.1-201ENST00000478559 1853 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 RNU5B-4P-201ENST00000363508 111 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 U6.112-201ENST00000384129 70 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 RNU6-851P-201ENST00000384565 107 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 SNORD65C-201ENST00000390962 71 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 RN7SKP285-201ENST00000410137 318 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 NUP35P2-201ENST00000416748 943 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 RPL21P40-201ENST00000428586 483 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 RPS7P2-201ENST00000435134 607 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 MRPS31P2-201ENST00000451581 518 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 GTF2IP12-201ENST00000456547 356 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.16□□□□□ -1.74
NPHP3Q7Z494 AC126389.1-201ENST00000477436 290 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 AC021205.2-201ENST00000480069 347 ntBASIC4.16□□□□□ -1.74
NPHP3Q7Z494 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms