Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.56□□□□□ -2
HOXC5Q00444 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.56□□□□□ -2
HOXC5Q00444 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC5Q00444 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HOXC5Q00444 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.56□□□□□ -2
HOXC5Q00444 MIR208A-201ENST00000362287 71 ntBASIC2.56□□□□□ -2
HOXC5Q00444 SNORD46.1-201ENST00000364139 104 ntBASIC2.56□□□□□ -2
HOXC5Q00444 RNU6-629P-201ENST00000384061 103 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AL354719.1-201ENST00000406535 843 ntBASIC2.56□□□□□ -2
HOXC5Q00444 Z86062.1-201ENST00000406773 777 ntBASIC2.56□□□□□ -2
HOXC5Q00444 SNORA11-201ENST00000408789 128 ntBASIC2.56□□□□□ -2
HOXC5Q00444 EEF1A1P41-201ENST00000414667 207 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC5Q00444 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 MRPS33P4-201ENST00000434892 317 ntBASIC2.56□□□□□ -2
HOXC5Q00444 MTND2P21-201ENST00000436242 1042 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.56□□□□□ -2
HOXC5Q00444 RSL24D1P2-201ENST00000445584 366 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 SSXP4-201ENST00000451349 245 ntBASIC2.56□□□□□ -2
HOXC5Q00444 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
HOXC5Q00444 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
HOXC5Q00444 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC5Q00444 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 RN7SKP96-201ENST00000516948 297 ntBASIC2.56□□□□□ -2
HOXC5Q00444 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 AC022080.3-201ENST00000544433 482 ntBASIC2.56□□□□□ -2
HOXC5Q00444 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.56□□□□□ -2
HOXC5Q00444 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.56□□□□□ -2
HOXC5Q00444 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
HOXC5Q00444 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.56□□□□□ -2
HOXC5Q00444 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.56□□□□□ -2
HOXC5Q00444 CYCSP41-201ENST00000616920 296 ntBASIC2.56□□□□□ -2
HOXC5Q00444 U73479.1-201ENST00000618062 168 ntBASIC2.56□□□□□ -2
HOXC5Q00444 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.56□□□□□ -2
HOXC5Q00444 AC090617.7-201ENST00000623952 126 ntBASIC2.56□□□□□ -2
HOXC5Q00444 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.56□□□□□ -2
HOXC5Q00444 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
HOXC5Q00444 SNORA25.6-201ENST00000364121 118 ntBASIC2.55□□□□□ -2
HOXC5Q00444 EIF5P1-201ENST00000400019 1231 ntBASIC2.55□□□□□ -2
HOXC5Q00444 MTCYBP24-201ENST00000420387 1106 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AL451062.2-201ENST00000427515 271 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.55□□□□□ -2
HOXC5Q00444 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.55□□□□□ -2
HOXC5Q00444 MRPL50P4-201ENST00000446432 475 ntBASIC2.55□□□□□ -2
HOXC5Q00444 RPL23AP15-201ENST00000450202 459 ntBASIC2.55□□□□□ -2
HOXC5Q00444 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.55□□□□□ -2
HOXC5Q00444 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
HOXC5Q00444 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC5Q00444 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.55□□□□□ -2
HOXC5Q00444 AC083906.5-201ENST00000503722 328 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AC111000.2-201ENST00000507775 550 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.55□□□□□ -2
HOXC5Q00444 RNU6-826P-201ENST00000516827 104 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AP004371.1-201ENST00000525240 214 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AC239860.2-201ENST00000525886 270 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC2.55□□□□□ -2
HOXC5Q00444 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.55□□□□□ -2
HOXC5Q00444 NOP56P3-201ENST00000549457 385 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.55□□□□□ -2
HOXC5Q00444 AC011978.2-201ENST00000569835 2054 ntBASIC2.55□□□□□ -2
HOXC5Q00444 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.55□□□□□ -2
HOXC5Q00444 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
HOXC5Q00444 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.55□□□□□ -2
HOXC5Q00444 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
HOXC5Q00444 AP001350.1-201ENST00000601906 1524 ntBASIC2.54□□□□□ -2
HOXC5Q00444 ZNF37BP-203ENST00000452306 1352 ntBASIC2.54□□□□□ -2
HOXC5Q00444 MTND4P8-201ENST00000514997 1362 ntBASIC2.54□□□□□ -2
HOXC5Q00444 MTND4P34-201ENST00000572715 1371 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AL645568.2-201ENST00000432815 1337 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC5Q00444 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.54□□□□□ -2
HOXC5Q00444 OR5H2-201ENST00000355273 945 ntBASIC2.54□□□□□ -2
HOXC5Q00444 RNU6-263P-201ENST00000363811 107 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AL512633.1-201ENST00000399931 655 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.54□□□□□ -2
HOXC5Q00444 VTA1P1-201ENST00000414044 866 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.54□□□□□ -2
HOXC5Q00444 RPL21P40-201ENST00000428586 483 ntBASIC2.54□□□□□ -2
HOXC5Q00444 RPL36P19-201ENST00000430744 301 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.54□□□□□ -2
HOXC5Q00444 AL513043.1-201ENST00000439124 535 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.54□□□□□ -2
HOXC5Q00444 AC097499.1-201ENST00000444277 208 ntBASIC2.54□□□□□ -2
HOXC5Q00444 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC2.54□□□□□ -2
HOXC5Q00444 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.54□□□□□ -2
HOXC5Q00444 ARL4AP2-201ENST00000507378 601 ntBASIC2.54□□□□□ -2
HOXC5Q00444 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
HOXC5Q00444 HMGB1P41-201ENST00000520234 440 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AC004486.1-201ENST00000546846 233 ntBASIC2.54□□□□□ -2
HOXC5Q00444 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.54□□□□□ -2
HOXC5Q00444 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms