Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 RN7SKP229-201ENST00000410465 302 ntBASIC5.24□□□□□ -1.57
CCNFP41002 RNU6-1148P-201ENST00000410992 104 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 BRWD1P3-201ENST00000428816 390 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 HMGB3P9-201ENST00000441799 583 ntBASIC5.24□□□□□ -1.57
CCNFP41002 PPP1R2P5-201ENST00000457256 603 ntBASIC5.24□□□□□ -1.57
CCNFP41002 GMFBP1-201ENST00000467831 427 ntBASIC5.24□□□□□ -1.57
CCNFP41002 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.24□□□□□ -1.57
CCNFP41002 RN7SL346P-201ENST00000491561 294 ntBASIC5.24□□□□□ -1.57
CCNFP41002 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 AC004062.1-201ENST00000509926 645 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC006427.1-201ENST00000514359 712 ntBASIC5.24□□□□□ -1.57
CCNFP41002 RNU4-29P-201ENST00000515943 174 ntBASIC5.24□□□□□ -1.57
CCNFP41002 NARSP2-201ENST00000518524 679 ntBASIC5.24□□□□□ -1.57
CCNFP41002 SUMO2P20-201ENST00000520803 283 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 AC103843.2-201ENST00000530523 682 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.24□□□□□ -1.57
CCNFP41002 BNIP3P6-201ENST00000549284 499 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 AC068831.4-201ENST00000556118 109 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 AC130324.3-201ENST00000614165 542 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC015914.2-201ENST00000618167 288 ntBASIC5.24□□□□□ -1.57
CCNFP41002 MIR6886-201ENST00000619864 61 ntBASIC5.24□□□□□ -1.57
CCNFP41002 MIR6837-201ENST00000620884 64 ntBASIC5.24□□□□□ -1.57
CCNFP41002 AC244100.1-202ENST00000621554 382 ntBASIC5.24□□□□□ -1.57
CCNFP41002 MIR4496-201ENST00000635896 61 ntBASIC5.24□□□□□ -1.57
CCNFP41002 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 AC083843.2-201ENST00000568248 6253 ntBASIC5.24□□□□□ -1.57
CCNFP41002 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.24□□□□□ -1.57
CCNFP41002 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.24□□□□□ -1.57
CCNFP41002 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.24□□□□□ -1.57
CCNFP41002 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CCNFP41002 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.23□□□□□ -1.57
CCNFP41002 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 MTCO1P11-201ENST00000429111 1528 ntBASIC5.23□□□□□ -1.57
CCNFP41002 IQCB2P-201ENST00000401788 1633 ntBASIC5.23□□□□□ -1.57
CCNFP41002 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 ASNSP1-201ENST00000518311 1939 ntBASIC5.23□□□□□ -1.57
CCNFP41002 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 RN7SKP160-201ENST00000363804 340 ntBASIC5.23□□□□□ -1.57
CCNFP41002 Y_RNA.184-201ENST00000363884 108 ntBASIC5.23□□□□□ -1.57
CCNFP41002 Y_RNA.384-201ENST00000383909 102 ntBASIC5.23□□□□□ -1.57
CCNFP41002 Y_RNA.431-201ENST00000384086 102 ntBASIC5.23□□□□□ -1.57
CCNFP41002 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCNFP41002 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCNFP41002 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 SRIP2-201ENST00000428470 166 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC092162.1-201ENST00000432828 434 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.23□□□□□ -1.57
CCNFP41002 MTND4P19-201ENST00000446659 478 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC006480.1-201ENST00000449887 378 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AL353691.1-201ENST00000451332 387 ntBASIC5.23□□□□□ -1.57
CCNFP41002 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AC007547.1-201ENST00000462177 490 ntBASIC5.23□□□□□ -1.57
CCNFP41002 SIAH1P1-201ENST00000479411 923 ntBASIC5.23□□□□□ -1.57
CCNFP41002 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 SNORA19.2-201ENST00000516013 114 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.23□□□□□ -1.57
CCNFP41002 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
CCNFP41002 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 MIR4742-201ENST00000581069 85 ntBASIC5.23□□□□□ -1.57
CCNFP41002 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.23□□□□□ -1.57
CCNFP41002 AC020910.2-201ENST00000603635 610 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AC010591.1-201ENST00000603941 649 ntBASIC5.23□□□□□ -1.57
CCNFP41002 AC104237.2-201ENST00000612456 443 ntBASIC5.23□□□□□ -1.57
CCNFP41002 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CCNFP41002 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
CCNFP41002 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCNFP41002 AL022322.2-201ENST00000624072 20397 ntBASIC5.23□□□□□ -1.57
CCNFP41002 ZNF734P-201ENST00000419494 1534 ntBASIC5.23□□□□□ -1.57
CCNFP41002 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.22□□□□□ -1.57
CCNFP41002 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms