Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC118273.2-201ENST00000532092 465 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 AL157394.1-201ENST00000562983 1224 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 CKS1BP3-201ENST00000600888 237 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SLC6A4P31645 AC009318.4-201ENST00000620496 486 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
SLC6A4P31645 AL157786.1-207ENST00000627771 695 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC6A4P31645 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC6A4P31645 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC6A4P31645 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC6A4P31645 SAGE2P-201ENST00000420011 2126 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 OR51H2P-202ENST00000641424 3046 ntBASIC4.58□□□□□ -1.68
SLC6A4P31645 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC6A4P31645 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SLC6A4P31645 AC095050.2-201ENST00000510748 1458 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC083843.3-201ENST00000623679 2186 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC6A4P31645 GNG5P1-201ENST00000255500 204 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 FRG1BP-201ENST00000278882 761 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 OR5P1P-201ENST00000299512 925 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MIR331-201ENST00000362302 94 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RNY4P34-201ENST00000364779 95 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RNU6-867P-201ENST00000364956 107 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 Y_RNA.372-201ENST00000365599 102 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 Y_RNA.554-201ENST00000384672 102 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MTCO3P40-201ENST00000392516 676 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RPL7P25-201ENST00000404151 721 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MIR1277-201ENST00000408536 78 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RNU2-21P-201ENST00000410368 188 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RN7SKP27-201ENST00000410684 333 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 RPL31P2-201ENST00000413849 377 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 DPPA2P1-201ENST00000428060 556 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RPEP2-201ENST00000432149 701 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 RPL17P49-201ENST00000443728 411 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 FAM103A2P-201ENST00000444122 354 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 PHBP16-201ENST00000446318 950 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 HMGB1P15-201ENST00000453854 435 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RN7SL98P-201ENST00000462271 300 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC091153.1-201ENST00000466297 402 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RN7SL810P-201ENST00000493031 276 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC083829.1-201ENST00000503756 657 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 PTGES3P3-201ENST00000511479 482 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC093677.1-201ENST00000514414 678 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 Y_RNA.672-201ENST00000516289 104 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 RNU6-714P-201ENST00000516963 103 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SLC6A4P31645 MIR4716-201ENST00000579628 84 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MIR548S-201ENST00000581352 82 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC008966.2-201ENST00000606157 453 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AL357078.3-201ENST00000607528 618 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AP002360.3-201ENST00000607673 710 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AC007014.2-201ENST00000615581 479 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 MLECP1-201ENST00000615893 709 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AC068831.8-201ENST00000620171 435 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SLC6A4P31645 AL359880.1-201ENST00000621879 266 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.57□□□□□ -1.68
SLC6A4P31645 MIR6863-201ENST00000636112 90 ntBASIC4.57□□□□□ -1.68
SLC6A4P31645 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC6A4P31645 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SLC6A4P31645 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SLC6A4P31645 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC6A4P31645 Z95327.2-201ENST00000414579 1873 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC6A4P31645 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.56□□□□□ -1.68
SLC6A4P31645 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SLC6A4P31645 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC6A4P31645 U8.3-201ENST00000363321 132 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SLC6A4P31645 RPS20P2-201ENST00000402520 389 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 AC245052.5-201ENST00000416320 649 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.56□□□□□ -1.68
SLC6A4P31645 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.56□□□□□ -1.68
SLC6A4P31645 RPS20P1-201ENST00000434853 354 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 SDCBPP1-201ENST00000440192 890 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 MTCO3P18-201ENST00000440206 761 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 PTMAP3-201ENST00000447474 330 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 RPL7L1P1-201ENST00000448259 785 ntBASIC4.56□□□□□ -1.68
SLC6A4P31645 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms