Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 RNU6-288P-201ENST00000363690 104 ntBASIC7.41□□□□□ -1.22
CD44P16070 RNU6-1226P-201ENST00000384317 107 ntBASIC7.41□□□□□ -1.22
CD44P16070 MIR99A-201ENST00000384906 81 ntBASIC7.41□□□□□ -1.22
CD44P16070 MIR301B-201ENST00000390813 78 ntBASIC7.41□□□□□ -1.22
CD44P16070 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 RN7SL216P-201ENST00000471607 298 ntBASIC7.41□□□□□ -1.22
CD44P16070 VN1R105P-201ENST00000486595 910 ntBASIC7.41□□□□□ -1.22
CD44P16070 AC146944.2-203ENST00000502493 354 ntBASIC7.41□□□□□ -1.22
CD44P16070 AC139495.1-202ENST00000513164 354 ntBASIC7.41□□□□□ -1.22
CD44P16070 AC011611.6-201ENST00000547483 255 ntBASIC7.41□□□□□ -1.22
CD44P16070 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC7.41□□□□□ -1.22
CD44P16070 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC7.41□□□□□ -1.22
CD44P16070 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.41□□□□□ -1.22
CD44P16070 AC106785.4-201ENST00000569492 412 ntBASIC7.41□□□□□ -1.22
CD44P16070 MIR3646-201ENST00000578301 84 ntBASIC7.41□□□□□ -1.22
CD44P16070 MIR548AC-201ENST00000585049 88 ntBASIC7.41□□□□□ -1.22
CD44P16070 AL079305.1-201ENST00000623159 3008 ntBASIC7.41□□□□□ -1.22
CD44P16070 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 RBMY1HP-201ENST00000382759 1389 ntBASIC7.41□□□□□ -1.22
CD44P16070 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
CD44P16070 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CD44P16070 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CD44P16070 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.41□□□□□ -1.22
CD44P16070 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC7.41□□□□□ -1.22
CD44P16070 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CD44P16070 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CD44P16070 AL359195.2-201ENST00000623657 4412 ntBASIC7.41□□□□□ -1.22
CD44P16070 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CD44P16070 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC7.4□□□□□ -1.22
CD44P16070 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC7.4□□□□□ -1.22
CD44P16070 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CD44P16070 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
CD44P16070 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CD44P16070 Y_RNA.123-201ENST00000363338 102 ntBASIC7.4□□□□□ -1.22
CD44P16070 Y_RNA.584-201ENST00000391090 114 ntBASIC7.4□□□□□ -1.22
CD44P16070 AL663061.1-201ENST00000416625 580 ntBASIC7.4□□□□□ -1.22
CD44P16070 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC7.4□□□□□ -1.22
CD44P16070 AC005154.2-201ENST00000438110 379 ntBASIC7.4□□□□□ -1.22
CD44P16070 AL356133.1-201ENST00000444762 372 ntBASIC7.4□□□□□ -1.22
CD44P16070 AL162389.1-201ENST00000449233 177 ntBASIC7.4□□□□□ -1.22
CD44P16070 RPS16P9-201ENST00000477220 427 ntBASIC7.4□□□□□ -1.22
CD44P16070 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 RN7SKP272-201ENST00000516988 232 ntBASIC7.4□□□□□ -1.22
CD44P16070 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.4□□□□□ -1.22
CD44P16070 PCED1B-AS1-207ENST00000551432 522 ntTSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 FAM30C-201ENST00000561158 410 ntBASIC7.4□□□□□ -1.22
CD44P16070 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 AP000787.2-201ENST00000604432 568 ntBASIC7.4□□□□□ -1.22
CD44P16070 AC069294.1-201ENST00000608397 350 ntBASIC7.4□□□□□ -1.22
CD44P16070 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC7.4□□□□□ -1.22
CD44P16070 AL352984.2-202ENST00000613699 155 ntBASIC7.4□□□□□ -1.22
CD44P16070 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CD44P16070 AC061999.1-201ENST00000624454 177 ntBASIC7.4□□□□□ -1.22
CD44P16070 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC7.4□□□□□ -1.22
CD44P16070 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.4□□□□□ -1.23
CD44P16070 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CD44P16070 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC7.4□□□□□ -1.23
CD44P16070 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
CD44P16070 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
CD44P16070 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.4□□□□□ -1.23
CD44P16070 AL731556.1-201ENST00000394628 3711 ntBASIC7.4□□□□□ -1.23
CD44P16070 OLMALINC-203ENST00000641087 3779 ntBASIC7.4□□□□□ -1.23
CD44P16070 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CD44P16070 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.4□□□□□ -1.23
CD44P16070 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 MAPK10-357ENST00000641831 2858 ntBASIC7.39□□□□□ -1.23
CD44P16070 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CD44P16070 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CD44P16070 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 RNA5SP361-201ENST00000362686 118 ntBASIC7.39□□□□□ -1.23
CD44P16070 RNU6-827P-201ENST00000365553 106 ntBASIC7.39□□□□□ -1.23
CD44P16070 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 RNU6-880P-201ENST00000384526 107 ntBASIC7.39□□□□□ -1.23
CD44P16070 RNA5SP474-201ENST00000391234 90 ntBASIC7.39□□□□□ -1.23
CD44P16070 RN7SKP30-201ENST00000411373 334 ntBASIC7.39□□□□□ -1.23
CD44P16070 AC006461.1-201ENST00000412637 326 ntBASIC7.39□□□□□ -1.23
CD44P16070 AL592148.1-201ENST00000413568 445 ntBASIC7.39□□□□□ -1.23
CD44P16070 PPIAP23-201ENST00000420099 497 ntBASIC7.39□□□□□ -1.23
CD44P16070 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 snoU13.30-201ENST00000458951 104 ntBASIC7.39□□□□□ -1.23
CD44P16070 RNU6-953P-201ENST00000459154 107 ntBASIC7.39□□□□□ -1.23
CD44P16070 RN7SL390P-201ENST00000470634 284 ntBASIC7.39□□□□□ -1.23
CD44P16070 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC7.39□□□□□ -1.23
CD44P16070 RPL10P7-201ENST00000495649 625 ntBASIC7.39□□□□□ -1.23
CD44P16070 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.39□□□□□ -1.23
CD44P16070 SNRPGP16-201ENST00000533275 226 ntBASIC7.39□□□□□ -1.23
CD44P16070 AC027667.1-201ENST00000545814 304 ntBASIC7.39□□□□□ -1.23
CD44P16070 HSPE1P4-201ENST00000550617 308 ntBASIC7.39□□□□□ -1.23
CD44P16070 AL773545.4-201ENST00000637262 310 ntBASIC7.39□□□□□ -1.23
CD44P16070 AL513478.4-201ENST00000641636 310 ntBASIC7.39□□□□□ -1.23
CD44P16070 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
CD44P16070 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms