Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 MIR3688-2-201ENST00000636963 87 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 CR383658.2-201ENST00000547576 1525 ntBASIC5.62□□□□□ -1.51
SMARCA5O60264 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.62□□□□□ -1.51
SMARCA5O60264 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SMARCA5O60264 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.62□□□□□ -1.51
SMARCA5O60264 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SMARCA5O60264 RNU6-433P-201ENST00000363216 104 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 MIR181A1-201ENST00000385026 110 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 Y_RNA.582-201ENST00000391023 95 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC245054.1-201ENST00000420944 258 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 RPEP3-201ENST00000425462 676 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 RPL21P91-201ENST00000429231 479 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 MTND3P21-201ENST00000433774 331 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 MTND4LP16-201ENST00000440828 295 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC098824.1-201ENST00000453565 980 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 SBDSP1-204ENST00000453858 737 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 RPS4XP10-201ENST00000465034 731 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.61□□□□□ -1.51
SMARCA5O60264 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC083829.1-201ENST00000503756 657 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC021678.1-201ENST00000505195 936 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 RN7SKP46-201ENST00000515942 234 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 SETP7-201ENST00000552169 453 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC012182.1-201ENST00000570133 895 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC141257.3-201ENST00000572906 215 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.61□□□□□ -1.51
SMARCA5O60264 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC020634.1-201ENST00000608701 549 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC092447.10-201ENST00000620607 1652 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.61□□□□□ -1.51
SMARCA5O60264 AC099654.5-201ENST00000636479 350 ntBASIC5.61□□□□□ -1.51
SMARCA5O60264 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SMARCA5O60264 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.61□□□□□ -1.51
SMARCA5O60264 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMARCA5O60264 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 RNA5SP258-201ENST00000362750 119 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 RN7SKP115-201ENST00000363177 317 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 SNORD113.2-201ENST00000364166 89 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 RNU6-1011P-201ENST00000384668 107 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL133270.1-201ENST00000402635 279 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 HMGB1P11-201ENST00000413899 637 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC009237.5-201ENST00000414271 501 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 COX6CP17-201ENST00000421389 185 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL391219.1-201ENST00000422570 483 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.6□□□□□ -1.51
SMARCA5O60264 RPS12P10-201ENST00000427031 377 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 MTCO2P11-201ENST00000431069 680 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL359265.2-201ENST00000434367 631 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.6□□□□□ -1.51
SMARCA5O60264 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 HMGB1P25-201ENST00000468402 607 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC017015.1-201ENST00000477387 286 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC023424.2-201ENST00000493479 777 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.6□□□□□ -1.51
SMARCA5O60264 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.6□□□□□ -1.51
SMARCA5O60264 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 PCMTD1P2-201ENST00000565017 355 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC009101.1-201ENST00000568135 242 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.6□□□□□ -1.51
SMARCA5O60264 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 MIR4443-201ENST00000585052 53 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL117336.2-201ENST00000602435 335 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 SEPT7P9-203ENST00000604116 343 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL451044.1-201ENST00000604867 238 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms