Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC079780.1-201ENST00000428259 207 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RPS17P8-201ENST00000434525 335 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RABEPKP1-201ENST00000440529 1026 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 ELOCP30-201ENST00000447108 299 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 NPM1P49-201ENST00000448027 714 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AL645939.1-201ENST00000453429 797 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 MTCYBP1-201ENST00000454315 1119 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AP000873.1-201ENST00000463987 400 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC010285.1-201ENST00000470580 392 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC104763.1-201ENST00000475274 360 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AP000926.1-201ENST00000479573 241 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RPS3AP50-201ENST00000487064 803 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC108022.1-201ENST00000493466 478 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC093278.1-201ENST00000494700 600 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 BNIP3P41-201ENST00000503774 571 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 NDUFB5P1-201ENST00000508134 564 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RNU6-720P-201ENST00000516363 108 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 MED28P5-201ENST00000528254 438 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC007599.1-201ENST00000568688 1174 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 MIR3146-201ENST00000580367 79 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 COX6CP3-201ENST00000580869 223 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RN7SL52P-201ENST00000584271 284 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 DUXAP4-201ENST00000603046 613 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC007038.2-201ENST00000608095 740 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AL353748.2-201ENST00000622148 471 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC244258.1-201ENST00000637553 1071 ntBASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LIN7CQ9NUP9 AC004925.1-201ENST00000624256 2706 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC024560.2-201ENST00000507981 1497 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC099654.2-201ENST00000433031 1980 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 Y_RNA.41-201ENST00000362646 102 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RNA5SP123-201ENST00000363244 119 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RNU6-637P-201ENST00000384050 107 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 SNORD96B-201ENST00000386148 79 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RNA5SP345-201ENST00000410646 108 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AL031779.1-201ENST00000415663 330 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 OR2AM1P-201ENST00000422137 422 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC019097.1-201ENST00000424783 735 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 FTH1P6-201ENST00000430768 320 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 SLC25A18P1-201ENST00000449385 454 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC005008.1-201ENST00000456151 612 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 snoU13.20-201ENST00000459180 104 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RN7SL610P-201ENST00000463845 291 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RN7SL41P-201ENST00000476144 297 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 TMED11P-201ENST00000479478 690 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 RNU6-430P-201ENST00000517078 107 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AL049839.1-201ENST00000556151 657 ntBASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.93□□□□□ -1.78
LIN7CQ9NUP9 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms