Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC022069.1-201ENST00000582910 658 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AP001029.3-201ENST00000588063 596 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AL669831.4-202ENST00000590817 238 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 VN1R88P-201ENST00000596787 292 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AL109653.1-201ENST00000603091 248 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AL627309.6-201ENST00000606857 840 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC021851.1-201ENST00000608537 1082 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AL390240.1-201ENST00000612950 384 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC084035.1-201ENST00000634543 607 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC127502.3-201ENST00000636170 1206 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 CR383658.2-201ENST00000547576 1525 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 AC103988.1-201ENST00000566382 2177 ntBASIC2.3□□□□□ -2.04
UPK3BQ9BT76 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
UPK3BQ9BT76 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC002546.1-201ENST00000588041 2504 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC073055.1-201ENST00000456901 1621 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SNORD56.3-201ENST00000363507 71 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SNORA38.1-201ENST00000364172 131 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 Y_RNA.333-201ENST00000365274 102 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 RNU6-441P-201ENST00000384545 106 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 ATF1P1-201ENST00000406040 927 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 RNU4-47P-201ENST00000410876 114 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 MTCO3P12-201ENST00000416718 547 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 RPL7P10-201ENST00000417407 739 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 PAICSP7-201ENST00000419829 962 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AL139281.1-201ENST00000422120 335 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC244505.4-201ENST00000434905 287 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC006028.1-201ENST00000438379 402 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SSXP5-201ENST00000443473 287 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 HMGN1P18-201ENST00000457642 277 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 snoU13.4-201ENST00000458916 104 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC025181.1-201ENST00000477507 416 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 HIGD1AP6-201ENST00000521833 279 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC019227.1-201ENST00000526902 510 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 OR8K4P-201ENST00000534608 872 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC004217.3-201ENST00000551552 878 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC015917.1-201ENST00000579654 510 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC012468.1-201ENST00000604888 430 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC131902.3-201ENST00000611767 581 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC092650.2-201ENST00000619984 902 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 LRRC77P-213ENST00000637727 880 ntBASIC2.29□□□□□ -2.04
UPK3BQ9BT76 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
UPK3BQ9BT76 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms