Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.32□□□□□ -1.72
TM4SF1P30408 AC023813.2-201ENST00000564321 469 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.32□□□□□ -1.72
TM4SF1P30408 AL450336.1-201ENST00000605180 586 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 BRDTP1-201ENST00000605735 677 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AC023158.2-201ENST00000614876 543 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AC109809.1-201ENST00000619665 545 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AC006065.5-201ENST00000623427 349 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AC091905.1-201ENST00000624400 311 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 AL732372.2-225ENST00000642124 456 ntBASIC4.32□□□□□ -1.72
TM4SF1P30408 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TM4SF1P30408 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TM4SF1P30408 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TM4SF1P30408 LINC02471-203ENST00000641941 4752 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 RNU4-47P-201ENST00000410876 114 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AL592310.1-201ENST00000414330 671 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 COTL1P1-201ENST00000422309 375 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF1P30408 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC114322.1-201ENST00000506771 926 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AP000790.1-201ENST00000528891 737 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.31□□□□□ -1.72
TM4SF1P30408 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC005832.3-201ENST00000537929 631 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.31□□□□□ -1.72
TM4SF1P30408 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.31□□□□□ -1.72
TM4SF1P30408 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.31□□□□□ -1.72
TM4SF1P30408 MIR4276-201ENST00000584832 70 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AL355812.1-201ENST00000603215 216 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AC009220.3-201ENST00000604318 586 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AC091946.2-201ENST00000606105 291 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC034229.4-201ENST00000607861 441 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC009974.1-201ENST00000608881 455 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AL162274.2-201ENST00000614406 332 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC013470.4-201ENST00000619978 986 ntBASIC4.31□□□□□ -1.72
TM4SF1P30408 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.31□□□□□ -1.72
TM4SF1P30408 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TM4SF1P30408 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TM4SF1P30408 OTUD4P1-201ENST00000237841 3067 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 ZNF37BP-203ENST00000452306 1352 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 OR10J6P-201ENST00000289731 930 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 MT-TC-201ENST00000387405 66 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 ERHP2-201ENST00000402323 299 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 HMGB1P49-201ENST00000418882 569 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF1P30408 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC4.3□□□□□ -1.72
TM4SF1P30408 OFD1P3Y-201ENST00000453312 783 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 RN7SL594P-201ENST00000470590 287 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC080014.1-201ENST00000496877 1201 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC005798.1-201ENST00000513715 387 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 MTND1P24-201ENST00000552175 861 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AP005205.1-201ENST00000563503 508 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC022662.1-201ENST00000580252 331 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.3□□□□□ -1.72
TM4SF1P30408 AC004987.4-201ENST00000603383 338 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 AC083899.3-201ENST00000603413 594 ntBASIC4.3□□□□□ -1.72
TM4SF1P30408 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.3□□□□□ -1.72
TM4SF1P30408 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TM4SF1P30408 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF1P30408 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.3□□□□□ -1.72
TM4SF1P30408 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TM4SF1P30408 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM4SF1P30408 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TM4SF1P30408 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms