Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT2A6NDA9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT2A6NDA9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT2A6NDA9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL157700.1-201ENST00000561973 1432 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RNU6-989P-201ENST00000362756 107 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RNU5D-1-201ENST00000363299 116 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 SNORA62.3-201ENST00000365110 153 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 SNORD82-201ENST00000365530 70 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RNU6-761P-201ENST00000384148 107 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL121972.1-201ENST00000402023 252 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 MTND4LP20-201ENST00000402379 270 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RNU2-42P-201ENST00000410697 113 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL161449.1-201ENST00000414531 1199 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 GTF2IP23-201ENST00000423746 351 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RPL7P44-201ENST00000424827 742 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL158071.1-201ENST00000430315 461 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC091286.1-201ENST00000431233 461 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC092641.1-201ENST00000440229 772 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 OR10R1P-201ENST00000441524 1141 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 NPM1P49-201ENST00000448027 714 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL031313.1-201ENST00000448435 256 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 TVP23BP2-201ENST00000455082 615 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC091564.1-201ENST00000464563 479 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AP000563.1-201ENST00000490865 758 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 KLRA1P-201ENST00000503499 986 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC093767.1-201ENST00000504523 156 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC026784.1-201ENST00000507986 352 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 MTCYBP16-201ENST00000509187 1129 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 SNORA67.7-201ENST00000516664 135 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 RNU6-1261P-201ENST00000517194 104 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 OR5B10P-201ENST00000532869 642 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 MIR5047-201ENST00000579212 100 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 MIR3158-1-201ENST00000583596 81 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 SNRPGP15-201ENST00000600149 222 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AP001521.1-201ENST00000609150 300 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AL157392.4-201ENST00000609756 345 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC023158.2-201ENST00000614876 543 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC231759.1-201ENST00000616455 597 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 AC244258.1-201ENST00000637553 1071 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 LINC02211-204ENST00000642024 1070 ntBASIC3.31□□□□□ -1.88
LRIT2A6NDA9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
LRIT2A6NDA9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC109315.1-201ENST00000584143 1347 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 RNU6-335P-201ENST00000364563 113 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 MIR218-2-201ENST00000385006 110 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC016769.3-201ENST00000396562 315 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 MRPS36P1-201ENST00000421291 307 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 MTCO2P23-201ENST00000425216 680 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 NANOGP2-201ENST00000435391 727 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC004854.1-201ENST00000440356 349 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 Z95327.1-201ENST00000446082 482 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 HMGB3P8-201ENST00000449709 577 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
LRIT2A6NDA9 SNORA84-201ENST00000459229 133 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 PLGLA-201ENST00000465668 449 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 AC108734.3-201ENST00000481241 1165 ntBASIC3.3□□□□□ -1.88
LRIT2A6NDA9 RPL23AP44-201ENST00000482216 473 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms