Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 Y_RNA.97-201ENST00000363094 102 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 RNU1-130P-201ENST00000363930 160 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 RNU6-289P-201ENST00000364093 107 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 SNORA75-201ENST00000384158 137 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 MIR23B-201ENST00000384832 97 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AL031679.1-201ENST00000400616 525 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AL022722.2-201ENST00000402519 180 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 RPL21P32-201ENST00000419877 477 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC098614.3-201ENST00000438957 440 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 ELOCP23-201ENST00000452014 332 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 SNRPFP4-201ENST00000456366 242 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC053481.1-201ENST00000467217 306 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 PABPC1P3-201ENST00000469174 459 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC096751.1-202ENST00000502691 1067 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC093767.1-201ENST00000504523 156 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC022447.3-201ENST00000506865 495 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 FABP5P5-201ENST00000515537 406 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 COX6CP8-201ENST00000522620 226 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC118273.2-201ENST00000532092 465 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 RN7SL176P-201ENST00000580352 264 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 MIR548AB-201ENST00000584917 84 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC007566.2-201ENST00000603642 413 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AC034229.5-201ENST00000624258 185 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 MIR492-201ENST00000638676 116 ntBASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC187A0A096LP49 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 OR52B1P-201ENST00000316506 909 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MIR383-201ENST00000362257 73 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 Y_RNA.813-201ENST00000364639 102 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 SNORA70E-201ENST00000384492 135 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MIR134-201ENST00000385258 73 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 U8.14-201ENST00000390843 143 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MIR548F1-201ENST00000408667 84 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 RN7SKP56-201ENST00000410513 331 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 RPL36AP10-201ENST00000421785 322 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 RPL23AP38-201ENST00000423801 469 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MTND1P2-201ENST00000430604 821 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 HSFY6P-201ENST00000445573 403 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL031584.1-201ENST00000447169 754 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 PLGLA-201ENST00000465668 449 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC090686.1-201ENST00000481577 749 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 HMGB1P36-201ENST00000487709 576 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 RN7SKP46-201ENST00000515942 234 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 RNU6-405P-201ENST00000516637 110 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 OR5AP1P-201ENST00000529730 940 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 OR6C73P-201ENST00000546432 358 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC087883.1-201ENST00000551882 391 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC092325.1-201ENST00000566449 554 ntBASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC187A0A096LP49 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms