Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC026741.1-201ENST00000605892 482 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC068831.7-201ENST00000616954 363 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AC040168.1-201ENST00000623594 991 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 AL392088.2-201ENST00000637607 285 ntBASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC40Q9H9A6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SNORA73.2-201ENST00000364946 201 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SNORD82-201ENST00000365530 70 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 RNU6-932P-201ENST00000391108 106 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 TMSB4XP8-201ENST00000402089 135 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 MTCO2P31-201ENST00000402702 684 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AL133384.1-201ENST00000412744 351 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 TMSB4XP6-201ENST00000415187 135 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC245291.1-201ENST00000419501 328 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 TMSB4XP1-201ENST00000424567 135 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 DUTP6-201ENST00000425573 462 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 DEFB130D-201ENST00000426866 237 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 ISCA1P2-201ENST00000438679 421 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 HMGB3P11-201ENST00000440127 604 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 PTGES3P5-201ENST00000455109 434 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 MTCO3P2-201ENST00000457365 171 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 PABPC1P3-201ENST00000469174 459 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC078857.1-201ENST00000469870 667 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC020898.1-201ENST00000474167 787 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 RPL23AP44-201ENST00000482216 473 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC048346.1-201ENST00000510247 144 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC105914.1-201ENST00000511798 226 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 PHBP14-201ENST00000512887 367 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 IGHV3-76-201ENST00000522465 295 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 OR8I1P-201ENST00000529291 931 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 MIR4789-201ENST00000577469 82 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC124283.4-201ENST00000581815 456 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AP002906.1-201ENST00000603405 233 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SNORA51-201ENST00000606420 132 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC011816.2-201ENST00000607089 556 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AL360181.4-201ENST00000621752 134 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 AL121594.5-201ENST00000631724 573 ntBASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
LRRC40Q9H9A6 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AL356967.1-201ENST00000406305 431 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 RPL17P35-201ENST00000432217 549 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC104027.1-201ENST00000521887 300 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 UBE2NP1-201ENST00000545592 458 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 SNORD84-203ENST00000584275 78 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AP001330.4-201ENST00000604350 154 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AL365400.2-201ENST00000605604 902 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 uc_338.1-201ENST00000612113 180 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AL162574.2-201ENST00000614618 657 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AL355810.1-201ENST00000614629 552 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC009318.4-201ENST00000620496 486 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 AC018816.2-201ENST00000621460 353 ntBASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LRRC40Q9H9A6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.36□□□□□ -1.87
LRRC40Q9H9A6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms