Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC093392.2-201ENST00000450682 337 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC098824.1-201ENST00000453565 980 ntBASIC4.15□□□□□ -1.75
RAE1P78406 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC231760.1-201ENST00000498002 260 ntBASIC4.15□□□□□ -1.75
RAE1P78406 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 NDUFB4P2-201ENST00000509515 391 ntBASIC4.15□□□□□ -1.75
RAE1P78406 PPBPP1-201ENST00000510807 373 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC091133.4-201ENST00000511142 308 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 SNORA18.6-201ENST00000516792 115 ntBASIC4.15□□□□□ -1.75
RAE1P78406 RNU6-430P-201ENST00000517078 107 ntBASIC4.15□□□□□ -1.75
RAE1P78406 MTND4LP26-201ENST00000518144 282 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.15□□□□□ -1.75
RAE1P78406 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 PHBP17-201ENST00000528576 541 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.15□□□□□ -1.75
RAE1P78406 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.15□□□□□ -1.75
RAE1P78406 AL352979.3-201ENST00000553515 247 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 AL121834.1-201ENST00000572284 509 ntBASIC4.15□□□□□ -1.75
RAE1P78406 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 OR4G1P-201ENST00000588632 938 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 YWHAQP7-201ENST00000603536 658 ntBASIC4.15□□□□□ -1.75
RAE1P78406 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 AL022154.1-201ENST00000604698 785 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AL354984.3-201ENST00000604803 325 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC126118.1-201ENST00000607744 628 ntBASIC4.15□□□□□ -1.75
RAE1P78406 AC068944.2-201ENST00000610373 403 ntBASIC4.15□□□□□ -1.75
RAE1P78406 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 AL596245.1-201ENST00000618994 362 ntBASIC4.15□□□□□ -1.75
RAE1P78406 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RAE1P78406 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RAE1P78406 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
RAE1P78406 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RAE1P78406 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
RAE1P78406 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.14□□□□□ -1.75
RAE1P78406 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAE1P78406 RNU1-108P-201ENST00000362556 161 ntBASIC4.14□□□□□ -1.75
RAE1P78406 RNA5SP505-201ENST00000364748 108 ntBASIC4.14□□□□□ -1.75
RAE1P78406 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RAE1P78406 AL583835.1-201ENST00000399570 407 ntBASIC4.14□□□□□ -1.75
RAE1P78406 RPL7P25-201ENST00000404151 721 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 AL590139.1-201ENST00000416267 400 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 C1DP2-201ENST00000418167 426 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 BRWD1P3-201ENST00000428816 390 ntBASIC4.14□□□□□ -1.75
RAE1P78406 NANOGP6-201ENST00000429190 847 ntBASIC4.14□□□□□ -1.75
RAE1P78406 MTND3P21-201ENST00000433774 331 ntBASIC4.14□□□□□ -1.75
RAE1P78406 RPL22P17-201ENST00000438729 315 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC127537.2-201ENST00000439258 465 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.14□□□□□ -1.75
RAE1P78406 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.14□□□□□ -1.75
RAE1P78406 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.14□□□□□ -1.75
RAE1P78406 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.14□□□□□ -1.75
RAE1P78406 RPL37P6-202ENST00000464216 403 ntBASIC4.14□□□□□ -1.75
RAE1P78406 RPL23AP72-201ENST00000492447 435 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 RNU6-714P-201ENST00000516963 103 ntBASIC4.14□□□□□ -1.75
RAE1P78406 MTCO2P4-201ENST00000517968 247 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.14□□□□□ -1.75
RAE1P78406 PTP4A1P6-201ENST00000531034 478 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.14□□□□□ -1.75
RAE1P78406 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 AC137800.2-201ENST00000574375 120 ntBASIC4.14□□□□□ -1.75
RAE1P78406 MIR3913-1-201ENST00000577744 102 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 MIR4801-201ENST00000582704 82 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC233280.2-201ENST00000603917 1070 ntBASIC4.14□□□□□ -1.75
RAE1P78406 RBM11P1-201ENST00000604951 799 ntBASIC4.14□□□□□ -1.75
RAE1P78406 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.14□□□□□ -1.75
RAE1P78406 AP005019.3-201ENST00000620418 560 ntBASIC4.14□□□□□ -1.75
RAE1P78406 AL596275.2-204ENST00000641628 552 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms