Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC113368.1-201ENST00000603736 382 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 DPRXP5-201ENST00000604662 539 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 AC004775.1-201ENST00000607389 753 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 uc_338.25-201ENST00000613756 156 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.64□□□□□ -1.83
CCNA1P78396 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.64□□□□□ -1.83
CCNA1P78396 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CCNA1P78396 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNA1P78396 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNA1P78396 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCNA1P78396 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CCNA1P78396 RNU6-543P-201ENST00000362576 108 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 SNORD15B-201ENST00000384714 146 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 UBE2V1P2-201ENST00000397758 440 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 RNA5SP229-201ENST00000410809 99 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 OFD1P18Y-201ENST00000420889 959 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNA1P78396 FABP5P3-201ENST00000437960 408 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC104057.1-201ENST00000515547 497 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC009812.2-201ENST00000517657 457 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNA1P78396 AC010198.2-201ENST00000550612 259 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC025918.2-201ENST00000558683 763 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 EIF5A2P1-201ENST00000564027 460 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.63□□□□□ -1.83
CCNA1P78396 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.63□□□□□ -1.83
CCNA1P78396 AC103881.1-201ENST00000603476 538 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AL390240.1-201ENST00000612950 384 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 AP003400.6-201ENST00000624698 740 ntBASIC3.63□□□□□ -1.83
CCNA1P78396 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
CCNA1P78396 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNA1P78396 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNA1P78396 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.63□□□□□ -1.83
CCNA1P78396 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCNA1P78396 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCNA1P78396 AC073055.1-201ENST00000456901 1621 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CCNA1P78396 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNA1P78396 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 ANKRD36P1-201ENST00000344424 659 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 RN7SKP220-201ENST00000410611 288 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 HMGB3P31-201ENST00000413333 595 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC073310.1-201ENST00000423226 1033 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC022018.1-201ENST00000430685 241 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 RPL36P19-201ENST00000430744 301 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 CST9LP2-201ENST00000437612 320 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNA1P78396 RPL12P26-201ENST00000452430 487 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 NECAP1P2-201ENST00000455668 727 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 PRDX3P4-201ENST00000470828 747 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC068724.1-201ENST00000487100 792 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 HMGB1P22-201ENST00000505315 124 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 RN7SKP272-201ENST00000516988 232 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC027309.2-201ENST00000520566 192 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNA1P78396 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.62□□□□□ -1.83
CCNA1P78396 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNA1P78396 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.62□□□□□ -1.83
CCNA1P78396 AP001029.3-201ENST00000588063 596 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AL033523.1-201ENST00000605153 153 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 BX322635.1-201ENST00000605804 496 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 OR2AS2P-201ENST00000606902 342 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 AC007998.5-201ENST00000622938 237 ntBASIC3.62□□□□□ -1.83
CCNA1P78396 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.62□□□□□ -1.83
CCNA1P78396 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.62□□□□□ -1.83
CCNA1P78396 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCNA1P78396 AC110774.1-201ENST00000623567 2018 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 AC083799.1-201ENST00000366451 910 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 MTCO3P31-201ENST00000405526 789 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 MTCO3P12-201ENST00000416718 547 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNA1P78396 AC093422.3-201ENST00000428506 305 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC005189.1-201ENST00000431286 310 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 AC005002.1-201ENST00000447458 540 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.61□□□□□ -1.83
CCNA1P78396 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.61□□□□□ -1.83
CCNA1P78396 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCNA1P78396 AC004924.1-201ENST00000480160 781 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 FCF1P3-201ENST00000496394 590 ntBASIC3.61□□□□□ -1.83
CCNA1P78396 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms