Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH4P55283 MIR5680-201ENST00000577577 84 ntBASIC3.35□□□□□ -1.87
CDH4P55283 ZNF415P1-201ENST00000582279 1166 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.35□□□□□ -1.87
CDH4P55283 AC105227.2-201ENST00000615075 605 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC090116.1-201ENST00000615679 446 ntBASIC3.35□□□□□ -1.87
CDH4P55283 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 AC068722.2-201ENST00000618734 544 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC020923.1-201ENST00000624021 917 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC092184.1-201ENST00000625042 715 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AL590396.4-201ENST00000636779 956 ntBASIC3.35□□□□□ -1.87
CDH4P55283 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH4P55283 AC073346.2-201ENST00000624724 2058 ntBASIC3.35□□□□□ -1.87
CDH4P55283 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.35□□□□□ -1.87
CDH4P55283 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH4P55283 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDH4P55283 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH4P55283 AC024341.1-201ENST00000526444 1552 ntBASIC3.34□□□□□ -1.87
CDH4P55283 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDH4P55283 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH4P55283 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH4P55283 RNU6-921P-201ENST00000384361 107 ntBASIC3.34□□□□□ -1.87
CDH4P55283 MIR649-201ENST00000384843 97 ntBASIC3.34□□□□□ -1.87
CDH4P55283 MIR184-201ENST00000384962 84 ntBASIC3.34□□□□□ -1.87
CDH4P55283 SNORA48.8-201ENST00000391324 134 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AP002784.2-201ENST00000397300 549 ntBASIC3.34□□□□□ -1.87
CDH4P55283 RNA5SP229-201ENST00000410809 99 ntBASIC3.34□□□□□ -1.87
CDH4P55283 RNU4-47P-201ENST00000410876 114 ntBASIC3.34□□□□□ -1.87
CDH4P55283 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH4P55283 OR51A3P-201ENST00000413596 924 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC009237.2-201ENST00000421358 284 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AL590762.3-201ENST00000436372 640 ntBASIC3.34□□□□□ -1.87
CDH4P55283 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC091862.1-201ENST00000438016 1100 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC002542.1-201ENST00000440683 193 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH4P55283 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDH4P55283 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH4P55283 AC010468.1-201ENST00000461022 817 ntBASIC3.34□□□□□ -1.87
CDH4P55283 SETP6-201ENST00000479329 568 ntBASIC3.34□□□□□ -1.87
CDH4P55283 CAB39P1-201ENST00000502277 460 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC011352.3-201ENST00000505162 593 ntBASIC3.34□□□□□ -1.87
CDH4P55283 HMGB1P22-201ENST00000505315 124 ntBASIC3.34□□□□□ -1.87
CDH4P55283 MTND3P24-201ENST00000506306 329 ntBASIC3.34□□□□□ -1.87
CDH4P55283 COL6A4P2-205ENST00000509855 506 ntBASIC3.34□□□□□ -1.87
CDH4P55283 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH4P55283 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.34□□□□□ -1.87
CDH4P55283 FABP5P12-201ENST00000515543 389 ntBASIC3.34□□□□□ -1.87
CDH4P55283 SNORA31.20-201ENST00000517111 133 ntBASIC3.34□□□□□ -1.87
CDH4P55283 OR8K2P-201ENST00000524645 927 ntBASIC3.34□□□□□ -1.87
CDH4P55283 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH4P55283 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH4P55283 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDH4P55283 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.34□□□□□ -1.87
CDH4P55283 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.34□□□□□ -1.87
CDH4P55283 AC010735.1-201ENST00000567305 1026 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AL021368.1-201ENST00000607490 540 ntBASIC3.34□□□□□ -1.87
CDH4P55283 MIR8084-201ENST00000614105 89 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC107308.1-201ENST00000615897 301 ntBASIC3.34□□□□□ -1.87
CDH4P55283 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH4P55283 AC006963.1-201ENST00000624003 1052 ntBASIC3.34□□□□□ -1.87
CDH4P55283 AC098679.5-201ENST00000624394 571 ntBASIC3.34□□□□□ -1.87
CDH4P55283 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.34□□□□□ -1.87
CDH4P55283 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.87
CDH4P55283 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDH4P55283 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDH4P55283 AC007496.3-201ENST00000624987 3443 ntBASIC3.34□□□□□ -1.88
CDH4P55283 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH4P55283 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH4P55283 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDH4P55283 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.33□□□□□ -1.88
CDH4P55283 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
CDH4P55283 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDH4P55283 RNA5SP295-201ENST00000362655 121 ntBASIC3.33□□□□□ -1.88
CDH4P55283 SNORA38.1-201ENST00000364172 131 ntBASIC3.33□□□□□ -1.88
CDH4P55283 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
CDH4P55283 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
CDH4P55283 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH4P55283 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
CDH4P55283 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.33□□□□□ -1.88
CDH4P55283 RPS7P2-201ENST00000435134 607 ntBASIC3.33□□□□□ -1.88
CDH4P55283 GXYLT1P1-201ENST00000446657 490 ntBASIC3.33□□□□□ -1.88
CDH4P55283 RPL7P59-201ENST00000447700 943 ntBASIC3.33□□□□□ -1.88
CDH4P55283 Z99127.3-201ENST00000448158 395 ntBASIC3.33□□□□□ -1.88
CDH4P55283 NPM1P13-201ENST00000452663 865 ntBASIC3.33□□□□□ -1.88
CDH4P55283 HMGB1P15-201ENST00000453854 435 ntBASIC3.33□□□□□ -1.88
CDH4P55283 BX510359.1-201ENST00000456973 237 ntBASIC3.33□□□□□ -1.88
CDH4P55283 snoU13.24-201ENST00000458998 104 ntBASIC3.33□□□□□ -1.88
CDH4P55283 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH4P55283 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.33□□□□□ -1.88
CDH4P55283 AC119751.1-201ENST00000513357 765 ntBASIC3.33□□□□□ -1.88
CDH4P55283 AC010265.1-201ENST00000513509 211 ntBASIC3.33□□□□□ -1.88
CDH4P55283 MTCO2P32-201ENST00000514865 403 ntBASIC3.33□□□□□ -1.88
CDH4P55283 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
CDH4P55283 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH4P55283 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH4P55283 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.33□□□□□ -1.88
CDH4P55283 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.33□□□□□ -1.88
CDH4P55283 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms