Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC022447.4-201ENST00000504053 364 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 SNORA40.15-201ENST00000516884 107 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC6.52□□□□□ -1.37
HOXA2O43364 AC007225.2-201ENST00000562529 256 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 MIR3189-201ENST00000578735 73 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.52□□□□□ -1.37
HOXA2O43364 NF1P5-201ENST00000588287 448 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 FAM27E4-201ENST00000605259 342 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 HMGB1P50-201ENST00000605814 607 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 RN7SL787P-201ENST00000613000 284 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA2O43364 AC116667.2-201ENST00000641075 823 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 AC008669.1-201ENST00000565823 2178 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
HOXA2O43364 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA2O43364 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
HOXA2O43364 AP000432.2-201ENST00000624164 2048 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.52□□□□□ -1.37
HOXA2O43364 SNX18P3-202ENST00000565670 1750 ntBASIC6.52□□□□□ -1.37
HOXA2O43364 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXA2O43364 TNPO1P2-201ENST00000426249 2665 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 Y_RNA.214-201ENST00000364201 112 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RNVU1-3-201ENST00000364313 161 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RNU6-637P-201ENST00000384050 107 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 Y_RNA.526-201ENST00000384572 110 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RNU6-754P-201ENST00000391166 107 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RNU6-1093P-201ENST00000391194 107 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AL590135.1-201ENST00000422215 156 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 BX323845.3-201ENST00000428215 527 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RPS3AP12-201ENST00000443616 753 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA2O43364 MED28P2-201ENST00000475771 317 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 FO393415.2-201ENST00000480085 343 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AC011005.2-201ENST00000487324 359 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AC004453.1-201ENST00000487895 408 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RN7SL57P-201ENST00000493687 290 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 RPL30P11-201ENST00000495304 339 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AC083829.1-201ENST00000503756 657 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 SNORA25.11-201ENST00000515935 105 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 Y_RNA.673-201ENST00000516306 88 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 Y_RNA.700-201ENST00000516806 100 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA2O43364 AC010547.6-201ENST00000571789 193 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 HMGB2P1-201ENST00000591146 634 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 AP001784.1-201ENST00000624107 428 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 AL512643.1-201ENST00000635735 524 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.51□□□□□ -1.37
HOXA2O43364 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.51□□□□□ -1.37
HOXA2O43364 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 MTND5P6-201ENST00000422338 1798 ntBASIC6.51□□□□□ -1.37
HOXA2O43364 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.51□□□□□ -1.37
HOXA2O43364 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
HOXA2O43364 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
HOXA2O43364 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HOXA2O43364 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HOXA2O43364 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HOXA2O43364 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
HOXA2O43364 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 AC009951.1-201ENST00000623674 2614 ntBASIC6.5□□□□□ -1.37
HOXA2O43364 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA2O43364 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
HOXA2O43364 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
HOXA2O43364 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.5□□□□□ -1.37
HOXA2O43364 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.5□□□□□ -1.37
HOXA2O43364 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.5□□□□□ -1.37
HOXA2O43364 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA2O43364 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms